Paraburkholderia ginsengisoli: I6I06_16630
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Entry
I6I06_16630 CDS
T07246
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pgis
Paraburkholderia ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgis03032
]
I6I06_16630
03036 Chromosome and associated proteins [BR:
pgis03036
]
I6I06_16630
03400 DNA repair and recombination proteins [BR:
pgis03400
]
I6I06_16630
DNA replication proteins [BR:
pgis03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I6I06_16630
Chromosome and associated proteins [BR:
pgis03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
I6I06_16630
DNA repair and recombination proteins [BR:
pgis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
I6I06_16630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QQC63890
UniProt:
A0A7T4T8X5
LinkDB
All DBs
Position
1:3709641..3709964
Genome browser
AA seq
107 aa
AA seq
DB search
MTKSELVAQLATRFPQLVLKDADFAVKTMLDAMSEALANGHRIEIRGFGSFGLNRRPSRV
GRNPKSGEKVLVPEKYVPHFKPGKELRERVDRRAGEPLKAEEPDDDL
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcggaattggtcgcccagctggctacgcgattcccgcagcttgtactcaaa
gatgcggatttcgcggtgaagacgatgcttgatgcgatgtcggaggcgcttgccaacggt
catcgcatcgaaattcgcggcttcggcagcttcgggctcaaccgccgtccctcccgcgtc
gggcgcaatccgaagtcgggcgagaaggtgttggtacctgagaagtatgtaccgcacttc
aagccgggcaaggaattgcgtgaacgggtagaccgtcgtgcgggcgagccattgaaggcc
gaagagccggatgacgatctgtaa
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integrated database retrieval system
