Paraburkholderia ginsengisoli: I6I06_20520
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Entry
I6I06_20520 CDS
T07246
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6I06_20520 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgis03019
]
I6I06_20520 (groL)
03110 Chaperones and folding catalysts [BR:
pgis03110
]
I6I06_20520 (groL)
03029 Mitochondrial biogenesis [BR:
pgis03029
]
I6I06_20520 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgis04147
]
I6I06_20520 (groL)
Enzymes [BR:
pgis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
I6I06_20520 (groL)
Messenger RNA biogenesis [BR:
pgis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
I6I06_20520 (groL)
Chaperones and folding catalysts [BR:
pgis03110
]
Heat shock proteins
HSP60 / Chaperonin
I6I06_20520 (groL)
Mitochondrial biogenesis [BR:
pgis03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
I6I06_20520 (groL)
Exosome [BR:
pgis04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
I6I06_20520 (groL)
Exosomal proteins of other body fluids (saliva and urine)
I6I06_20520 (groL)
Exosomal proteins of breast cancer cells
I6I06_20520 (groL)
Exosomal proteins of colorectal cancer cells
I6I06_20520 (groL)
Exosomal proteins of bladder cancer cells
I6I06_20520 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5881
Motif
Other DBs
NCBI-ProteinID:
QQC67335
UniProt:
A0A7T4TBU0
LinkDB
All DBs
Position
2:complement(860689..862329)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKGIIFSDVARSKLVEGVNILANAVKVTLGPKGRNVVLERSFGSPVVTKDGVSVAKEI
ELPDRVQNIGAQLVKEVASRTSDAAGDGTTTATVLAQAIVREGQKYVAAGLNPLDLKRGI
DKAVIAAIDELKKISKPTTTSKEIAQVATISANGEESIGQRIAEAIDRVGKEGVITVEDG
KSLDDELDVVEGLQFDRGYLSPYFINDQEKQVAVLDNPFVLLHDKKVSNIRELLPVLEQV
AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKALLEDIAILTGGQV
IAEETGLTLEKATLAELGQAKRIEVGKENTTVIDGAGERGNIEARVKQIRAQIEEASSDY
DREKLQERVAKLAGGVAVIKVGGATEIEVKEKKDRVDDALHATRAAVEEGIVPGGGVALI
RVRKAISGLKGANADQDAGIKIVLRALEEPLRQIVTNAGVEASVVVAKVAEGSGNFGYNA
QTGEYGDLVESGVLDPTKVTRTALQNAASVAALLLTTDATVHEAPKDAAPATPAGGPGAP
GAGFDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaaggaatcattttcagcgatgtcgcgcgctcgaaactcgtcgaaggtgta
aacattctcgctaacgcagtcaaggtgacgctcggaccgaagggccgcaacgtggtgctg
gagcgcagcttcggctcgccggtcgtgaccaaggacggcgtatctgtcgcgaaggaaatc
gaattgccggatcgcgtgcagaacatcggcgcgcaactggtgaaggaagtcgcatcgcgc
accagcgacgcggccggcgacggcacgaccaccgcgaccgtgctcgctcaggccatcgtg
cgcgaaggtcagaagtatgtggccgccggtctgaatccgctcgacctgaagcgcggtatc
gacaaggccgtgatcgcggcgatcgacgaattgaagaagatcagcaagccaaccaccacg
agcaaggaaatcgcccaggtcgcgacgatctcggcgaatggcgaagaatcgatcggccag
cggattgccgaggcgatcgatcgggtcggcaaggaaggcgtgatcaccgtcgaagacggc
aagtcgctcgacgacgaactcgacgtggtggaaggcctgcaattcgatcgcggctacctg
tcgccgtatttcatcaacgatcaggagaagcaggtcgcggtgctggacaatccgttcgtt
ttgctgcacgacaagaaagtttcgaacatccgcgagctgctgccggtgctcgaacaggtc
gcgaaagcgggccgtccgttgctgatcattgccgaagacgtggaaggtgaagcgcttgcg
acgctggtggtgaacaacattcgcggcattctgaaaacggtggccgtcaaagcgccgggc
ttcggcgaccgccgcaaggcgctgctcgaagacatcgcgatcctgaccggcggccaggtg
atcgccgaagagaccggcctgacgctggaaaaagcgacgctcgccgaactgggccaggcc
aagcgcatcgaggtcggcaaggaaaacaccaccgtgatcgacggcgcgggagagcgcggc
aatatcgaagcgcgcgtcaagcagattcgtgcgcagatcgaagaagccagttccgactac
gaccgcgagaagctgcaggaacgcgtggccaaactcgccggcggcgtggcggtcatcaag
gtcggcggcgcgaccgaaatcgaggtcaaggaaaagaaagaccgcgtcgacgacgcgctg
cacgcgacgcgcgcggctgtcgaggaaggcatcgtgccgggcggcggcgttgcactgatt
cgcgtgcgcaaggcgatcagcggactcaaaggcgcgaacgcggatcaggacgccggcatc
aagatcgtgttgcgcgcgctcgaagaaccgttgcgccagatcgtgaccaacgccggtgtg
gaggcaagcgtcgtggtcgcgaaggtcgccgagggcagcggcaactttggctacaacgct
cagaccggcgagtatggcgacctcgtcgaatcgggcgtgctcgatccgaccaaggtcacg
cgcacggcgctgcaaaacgcggcatcggtcgccgcgctgctgctgaccaccgacgccacc
gtgcacgaagcaccgaaggatgccgctccggcgacgcccgcgggcggaccgggcgcgccg
ggcgccggcttcgacttctga
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