Paraburkholderia ginsengisoli: I6I06_21725
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Entry
I6I06_21725 CDS
T07246
Name
(GenBank) DEAD/DEAH box helicase family protein
Organism
pgis
Paraburkholderia ginsengisoli
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
AAA_34
Flavi_DEAD
AAA_22
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QQC67538
UniProt:
A0A7T4N976
LinkDB
All DBs
Position
2:1122656..1126180
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AA seq
1174 aa
AA seq
DB search
MSSVFFDRERIAEWLGDRAVAKARSVGPVTHVRWQGATLSGDVQGTQPLPYRTRVRFRTD
GGSPWAQSDCSCPVGRDCKHVAALLLAELDYHDEMDHITQVDPDQDHAPDDGTSPSSLPP
KPLTNLTRPSGVRPEVVSWLERFRARAEAAGTVAQKAGAVRHQTLAYRLNWSDFHMRHEV
VLYRARCNLDGVVVAIDEPWDNVEAALLKQPKFVSDEDLSILRGLWLGRSREDFGQFILR
GTNGAEMLQKLISTGRLFFDFEPAPGRAEPAPLARAADRPGRIEWEPLADQRLRPVLRTE
PRASMVLPTEPVWYVDGAANEAGIVQSSLPFQQLPDYLAMPPISLAEAPLVASVLREIAP
GLPLPPTHDASAIRVIDVEPVPVLTLNSHALPSAAKGERRKTETVELAGVSFDYDGVSIN
VDSSVTLVPMPGGDVIHIRRRYDAEKKRLLELRKTGLQKVPTSRVYASRLLPDTMLGLPD
TDAWSAFVNDAVPELVSQGWRVTMAPEFRYNVIEIDAIDGTAHQAGDGWFDLEMGIRIGE
RNVRLEPLLADLFRRDRRWLSGALESIADSEPIELKTEENKRLRLRADRLKPVVRVLVDL
FDSLGGTLAEGAPLRVPSVDAGRLDALNETGRWQFRGDDSIRQLARRLQAGPGLREVPVP
RGLKAELRAYQHQGLNWMQFLREQDLAGVLADDMGLGKTVQTLAHILAEKEAGRLKRPAL
IVVPTTLVHNWREEARRFAPELKVLVLNGPQRKERFEQIGEHELILTTYALLWRDQKVLA
EHEYHLLILDEAQYVKNASTKAAQAIRGLRARHRLCLTGTPLENHLGELWSQFDFLLPGF
LGSQKDFTRRWRNPIEKNGDGVRRALLARRIRPFMLRRRKDEVAKELPAKTTIVCSVDLE
GAQRDLYETVRTAMQEKVRVAVSAQGLARSHIIVLDALLKLRQVCCDPRLVRTLKAGDAV
QPDQATAGRSAEPAADSPTGKRGKADHEKLEKSARAMRSAKLDLLLSMLPELIEEGRRVL
LFSQFTGMLSLIAEALDEAAIPYVILTGDTTDRVTPVERFQQGDVPLFLISLKAGGVGLN
LTAADTVIHYDPWWNPAAENQATDRAHRLGQDKPVFVYKLIAAGSIEEKIVELQEQKAGL
ADSILSEDAAGAAKFSDDDLDALFAPMPEIEGAR
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagttttctttgatcgggaacggattgcagaatggctcggtgatcgggccgtg
gccaaagcgcgctcggtgggtcccgtcacgcacgtgaggtggcagggcgccacgctcagt
ggcgacgtccagggcacgcagccgttgccgtaccgaacacgcgtgcgctttcgcaccgac
ggcggttcgccgtgggcacagagcgactgcagctgcccggtcggccgcgactgcaagcac
gtcgccgcgctgctgctcgccgaactcgactatcacgacgagatggaccacatcacccag
gtcgaccccgaccaggaccacgcgccggacgacggcacctcaccatccagtctgccgccg
aaacccttgacgaatctgacccggccgtccggcgtgcgtcccgaagtggtgagctggctg
gagcgtttccgtgcccgcgccgaagccgccggcacggtcgcgcagaaagcgggcgccgtg
cgccaccagacgctggcgtaccggctgaactggtccgacttccacatgcgccacgaggtc
gtgctttatcgcgcgcgctgcaacctggacggcgtggtcgtcgcaatcgacgaaccctgg
gacaacgtggaagccgcgctcctcaagcagcctaaattcgtctccgacgaagacttgtcg
atcctgcgcggcctgtggctcggccgctcgcgcgaggacttcgggcagttcatcctgcgc
ggcaccaatggcgcggagatgctgcagaagctgatttcgacggggcgtctgttcttcgat
ttcgaacccgcaccgggtcgcgcggaaccggccccgctggcgcgcgccgccgaccgcccc
ggccgcatcgaatgggagccgctcgccgaccagcgtctgcggcccgtgctgcgcaccgaa
ccgcgcgcgtcgatggttctgccgaccgagccggtctggtatgtcgacggcgcggcgaac
gaagcgggcatcgtccagtcgtcgctgccgttccagcagttgcccgattacctcgcgatg
ccgccgatctcgctcgctgaagcaccgctggtcgcgtcggtgctgcgcgagatcgcgccc
ggcttgccgctgccgcccacgcacgacgcgtccgcgatccgcgtgatcgacgtcgagccg
gtgccggtgcttacgctcaacagccacgcgttgccgtcggcggcgaagggcgagcggcgt
aaaactgagacggtcgaactggccggcgtgagcttcgactacgacggcgtgagcatcaac
gtcgatagtagtgtcacgctggtgccgatgccgggcggcgatgtgatccatatccgccgc
cgttacgacgccgagaaaaagcgtctgctggaactgcgcaagaccggcctgcagaaagtg
ccgaccagccgcgtctacgcgtcgcgcctgttgcccgacacgatgctcggcttgcccgat
accgacgcgtggtcggcgttcgtcaacgacgcggtgccggagctcgtgagccagggctgg
cgcgtaacgatggcgccggagttccgctacaacgtgatcgagatcgacgcgatcgacggc
accgcgcatcaggccggcgacggctggttcgatctggagatgggcattcgcatcggcgag
cgcaacgtgcggctcgagccgctgctcgccgacctgttccggcgcgatcggcgctggctg
agcggcgcgctcgagagcatcgccgacagcgaaccgatcgagctgaagaccgaagagaac
aagcggctgcgcttgcgtgccgatcgtctgaagccggtggtgcgggtactcgtcgatctg
ttcgattcgctcggcggcacgctggccgaaggcgcgccgctgcgcgtgccgtcggtcgat
gccgggcggctcgacgcgttgaacgagacgggccgctggcaattccgcggcgacgattcg
atacgccagctcgcgcgtcgtctgcaagccgggcccggcctgcgcgaagtgccggtgccg
cgcggtctgaaggcggaactgcgcgcgtatcagcaccaaggcctgaactggatgcagttc
ctgcgcgaacaggacctggccggcgtgctcgccgacgacatggggctcggcaagaccgtg
cagacgctcgcgcacattctcgcggagaaggaggcggggcggctgaagcgtcccgcgctg
atcgtcgtgccgaccacgctcgtgcacaactggcgcgaggaagcgcgacgcttcgcgccc
gaattgaaggtgctggttctcaatggcccgcaacgcaaggagcgcttcgagcagatcggt
gaacacgaactgattctgacgacctacgcgttgctgtggcgcgatcagaaggtgctcgcc
gagcacgagtatcacctgctgattctcgacgaagcgcagtacgtgaagaacgccagcacc
aaggccgcgcaggcgatccgcgggttgcgcgcgcggcatcggctgtgtctgacgggcacg
ccgctggagaatcacctcggcgagttgtggtcacagttcgattttctgctgccgggtttc
ctcggcagccagaaagacttcacgcggcgctggcgcaatccgatcgaaaagaacggcgac
ggcgtgcgtcgcgcgttgctcgcgcgccgtatccggccattcatgctgcgccgtcgcaag
gacgaggtcgcgaaggaactgcccgcgaagaccaccatcgtgtgttcggtcgatctggaa
ggcgcgcagcgcgatctctacgaaacggtgcgcacggcgatgcaggagaaagtgcgcgtt
gcggtcagcgcgcaggggctcgcgcgcagccacatcatcgtgctggacgcgttgttgaaa
ctgcgccaggtgtgctgcgatccacgcctcgtcaggacgctcaaggccggcgatgccgtg
cagccggatcaagcgacagccgggcgttccgccgaacccgcggccgactcgccgactggc
aagcgaggcaaagcggaccacgaaaagctcgagaagagcgcgcgcgcgatgcggtcggcc
aagctcgatctgctgctgtcgatgctgccggagctgatcgaagaagggcgccgcgtgctg
ctgttttcgcagttcaccggcatgctgtcgctgattgccgaggcgctcgacgaagccgcc
attccatacgtgatcctgaccggcgacaccaccgatcgcgtcacgcccgtcgagcggttc
cagcaaggcgacgtgccgctgttcctgatcagcctcaaggcgggcggcgtcggtctgaac
ctcactgccgccgacacggtgatccactacgatccatggtggaacccggccgccgagaat
caggcgaccgaccgcgcgcatcggctggggcaggacaagccggtgttcgtctacaaactg
atcgcagcgggcagtatcgaagaaaagatcgtggaattgcaggagcagaaggcggggctc
gccgacagcatcctctccgaagacgcggcgggcgccgccaagttttccgacgacgacctg
gacgcgctgttcgcgccgatgccggagatcgaaggcgcgcggtag
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