Paraburkholderia ginsengisoli: I6I06_22175
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Entry
I6I06_22175 CDS
T07246
Name
(GenBank) sarcosine oxidase subunit alpha family protein
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis00260
Glycine, serine and threonine metabolism
pgis01100
Metabolic pathways
Module
pgis_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
I6I06_22175
Enzymes [BR:
pgis01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
I6I06_22175
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
I6I06_22175
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
NAD_binding_8
Pyr_redox_3
DAO
Pyr_redox
FAD_binding_2
HI0933_like
NAD_binding_7
GIDA
FAD_binding_3
AlaDh_PNT_C
XdhC_C
Thi4
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QQC67612
UniProt:
A0A7T4N9B6
LinkDB
All DBs
Position
2:1239269..1242271
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AA seq
1000 aa
AA seq
DB search
MSQKDRLPNGGRINRAIALSFTFNGVKYQGFQGDTLASALLANGVHFVARSWKYHRPRGI
VTAGVEEPNAVVQLETGAYTVPNARATEVELYQGLVATSVNAKPSIEKDRMAINQKIARF
IPAGFYYKTFMWPRKFWPKYEEAIRDAAGLGKAPEQPDADRYDKCFAHCDVLVVGGGPTG
LAAAHAAALSGARVTLVDDQPELGGSLLSCRAEIDGKPALQWVQKIEDELRQMPDVKILS
RSTAFGYQDHNLVTVTQRLTEHLPVSQRKGTRELLWKIRAKRVILATGAHERPIVFGNND
LPGVMLASAVSTYLHRYAVLPGRNAVVFTNNDDGYQCALDLKAAGAQVTVIDPRAGESKG
TLPALARRYGVKVMSGAVVTAAHGKLRVASVDVALYSNGQLGAQQGALPCDLLAMSGGWS
PVLHLFAQSGGKAHWHDDKACFVPGKAMQAEASVGACAGDFTLGQGIRFAVDAGVEAARA
ADYIVARPNPVQVAELTETKLAPLWLVGGREMATRGPKQFVDFQNDVSAADIFLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAQALGKTIPETGTTTFRPNYTPVTFGTFAG
RELGEFLDPVRKTAVHEWHVENGAAFEDVGNWKRPWYYPKADEDMHAAVARESLAVRTSV
GILDASTLGKIDIQGPDAAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLA
DQHYMMTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVC
HDIDFANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMTAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSMTPYDLGMGGLVAKSKDFLGKRSLTRSDTA
KAGRKQLVGLLSDDPSFVIPEGSQIVAGPFQGDTAPMLGHVTSSYYSPILKRSIAMAVVK
GGLDRIGATVTIPLSSGKQIAAKVTSSVFYDSEGARQHVE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgactgcccaacggcgggcgcatcaatcgcgcgattgcactgagc
ttcacgttcaacggcgtcaaatatcagggcttccagggcgacacgctcgcgtccgcgctg
ctcgcgaacggcgtgcacttcgtcgcgcgcagctggaagtatcaccggccgcgcggcatc
gtgacggcgggcgtcgaagagcccaatgcggtcgtgcaactcgaaaccggtgcgtacacg
gtgccgaatgcgcgcgcgaccgaagtggagctatatcaggggctcgtcgccaccagcgtg
aacgcgaagccgagcatcgagaaagaccgcatggcgatcaaccagaagatcgcgcgcttc
attcccgcgggcttctactacaagaccttcatgtggccacgcaaattctggccgaagtat
gaagaggcgatccgcgacgcggccggtctcggcaaggcgcccgagcagcccgacgccgac
cgctacgacaagtgctttgctcattgcgacgtgctggtggtcggcggcggcccgaccggc
cttgcggccgcgcatgcggcggcgctctcaggcgcgcgcgtgacgctggtcgacgatcag
ccggaactcggcggctcgctgctgtcgtgccgcgcggagatcgacggcaaacccgcgctg
caatgggtgcagaagattgaagacgaattgcgccagatgcccgacgtgaagatcctgtcg
cgcagcaccgcgttcggctatcaggatcacaacctcgtgacggtgacgcagcggctcacc
gagcatctgcccgtctcgcaacgcaagggcacgcgcgaactgctgtggaaaatccgcgcg
aaacgcgtgattctcgcgaccggcgcgcatgaacggccgatcgtgttcggcaataacgat
ctgccgggcgtgatgctggcgtcggcggtgtcgacttatctgcatcgctatgcggtgctg
ccggggcgcaacgcggtggtgttcacgaacaacgacgacggctatcaatgcgcgctcgac
ctgaaggcggccggcgcgcaggtgacggtgatcgatccgcgtgcgggcgaatcgaagggc
acgctgcccgcgctggcgcgccgctatggcgtcaaggtgatgagcggcgcagtggtgacg
gcggcgcatggcaagctgcgcgtcgcatcggtcgacgtggcgttgtattcgaatggacag
ctcggggcgcagcagggcgcattgccgtgcgatctgctcgcgatgtcgggcggctggagc
ccggtgctgcacctgttcgcccaatcgggcggcaaggcgcactggcatgacgacaaggcc
tgcttcgtacccggcaaggcgatgcaggcggaggcgagcgtcggcgcgtgcgcgggcgac
ttcacattgggccagggcatccgcttcgcggtcgatgcgggtgtcgaggcggcgcgcgcc
gccgactacatcgtcgcgcgaccgaatcccgtgcaggtggccgagctgaccgagacgaag
ctcgcgccgctatggctggtcggcggtcgcgagatggccacgcgtggaccgaagcagttc
gtcgatttccagaacgacgtgtcggcggcggatatttttctcgccgcgcgcgagggcttc
gaatccgtcgagcacgtgaagcgctataccgcgatgggtttcggcaccgaccagggcaaa
ctcggcaacatcaacggcatggcgattctcgcgcaggcgctcggcaagacgattcccgaa
accggcacgacgactttccggccgaactacacgccggtgacgttcggcacgttcgccggc
cgcgagctgggcgagtttctcgacccggtgcgcaagacggcggtgcacgaatggcatgtc
gaaaacggcgcggcgttcgaggacgtcggcaactggaagcgtccctggtactacccgaag
gcggacgaagacatgcacgcggcggtcgcgcgcgaatcgctcgcggtgcgtacgagcgtc
ggcattctcgacgcgtcgacgctcggcaagatcgacattcagggccccgatgccgcgaaa
ctgctgaactgggtctacacgaatccgtggagcaagctggaagtcggcaagtgccgctac
ggcctgatgctcgacgaaaacggcatgatcttcgacgatggcgtcaccgtgcgtctcgcc
gaccagcactacatgatgacgaccaccaccggcggcgcggcgcgcgtgctcacgtggctc
gaacgctggctgcaaacggagtggccggacatgcgcgtgcggcttgcgtcggtcacggat
cactgggccacgttcgccgtggtcggcccgaacagccgcaaggtcttgcagaaggtctgc
cacgacatcgacttcgcgaacgcggcatttccgttcatgagctatcgcgaaggcacggtg
gcgggcgcggcgtcgcgtgtcatgcgcatcagcttctccggcgaactcgcgtatgaagtg
aacgtgccggcgaatgtcgggcgcgcggtgtgggaagcgttgatgaccgcgggcgcggaa
ttcgacatcacgccgtacggcaccgaaacgatgcacgtgctgcgtgcggagaagggctac
atcatcgtcggtcaggatacggacggctcgatgacgccgtacgacctcggcatgggcggg
ctcgtcgcgaagtcgaaagacttcctcggcaagcgctcgttgacgcgctcggataccgcg
aaggcggggcgcaagcagctggtcggattgctgtcggacgatccgtcgttcgtgataccg
gagggctcgcagatcgtcgccggtcccttccagggcgacaccgcgccgatgctcgggcat
gtcacgtcgagctactacagcccgatcctgaagcgctcgattgcgatggcggtcgtgaag
ggcggtctcgacaggatcggcgcaacggtcacgatcccgctttccagcggcaaacagatc
gcggccaaagtcaccagttcggtgttctacgacagcgaaggagcacgtcaacatgtggaa
tga
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