Paraburkholderia ginsengisoli: I6I06_28575
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Entry
I6I06_28575 CDS
T07246
Name
(GenBank) glycoside hydrolase family 28
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis00040
Pentose and glucuronate interconversions
pgis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
I6I06_28575
Enzymes [BR:
pgis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
I6I06_28575
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
QQC67941
UniProt:
A0A7T4N9X2
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All DBs
Position
unnamed:complement(31910..34567)
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AA seq
885 aa
AA seq
DB search
MKMRSTRELAVLGLSVLTLAACGDGNGLGSNTPGGNNGTGGGNTGTPTTWTPGRYAADPN
LPDSPALPLDTQVCKVLEASDTLVKNADGSLPASADPTPATYGGATTKLNNPDQARIQAA
LDACGAAVDAEVGSQIAQADQQAAAKQQAANQPLVNVGGASGETLSNPAYKGSHFAVRLV
KSSSGRGNAFLSGPLVLPSGVTLWVDDGVTLFASRDVVVYDKAPQDRPNPITCGAAVNNP
AGLPAPAGTVNAGQATLAGVSGMQNCYPLIRGNHTVNAAIMGTGSIDARGYMPLISSSSL
YPTIRWATGATEKFTYSGNNITGVVTPKFSCTNTIAAYRAGTLAPEGTACDVVTAMGTAT
LTTPAVTYVVNRQATSVPSGVTVNSPGCASGTAGCARWVPASWWDVAYHGNKDIGGGPYS
FQGNPGMVWLQQSKNLTLYQITLRNSTFFTVEADGVDGLTAWGIKIITPLLPDAANLASV
GLNNDGFDGVNGSYSHLYTGAQISASSTGVKNTDGIDPSVANGPEHASLGTGSKTTSGSP
IYFDGYVKNVAIVYNYLSPSDDNVAFKGGLPDPRVAGAKGAQNGSPAANMLWGIDGNRDV
SSNRTYGITVAHNHDYNGHGLSIGSPTNAGVRNIHFYDNYFDSIYDGTNAATDMGVVGLR
IKSGQARGGDVSNIYYDGACMRGIGSFLVFDMYYTDPAADPISYTGLGWQPPSFHDINVS
NVRMMNIPSNKAAGKAGAGSLTFRGLHADTSFANTQSVIQLSMNNVVADNDVALSISNLS
KGVVNIGSTDGSSQSKAANATLNLGANVSLLGQSFAHGTGGILTNTSSGAGKYTAPTNTL
NLTVNGSDDAGSATDTNPAATIVSQNPKLSLCDNPASWPTFPNVK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcgttcaacccgagagctagcagtgctcggcctatcggtcctgaccttggcc
gcttgcggcgatggcaatggacttggcagtaacactcctggcggcaataacggcactggc
ggcggcaacaccggcacgcccacgacctggactccgggtcgctacgccgccgaccccaac
ctgcccgactccccagccttgccgctggatacccaggtctgcaaggttctggaggccagc
gacacgttggtcaagaacgccgacggctccctgcccgccagcgccgatccgactcccgcg
acctatggtggtgcaacgaccaagctaaacaatccggaccaggcaagaattcaagccgcg
ctggacgcatgcggcgcagccgtggacgccgaggttggcagccagattgcccaggccgat
caacaggcggctgcgaaacaacaggcggccaatcagccgctggtgaatgtcggcggtgct
tccggcgagaccctgtcgaacccggcttacaagggcagtcactttgccgtgcggctggtc
aaaagcagcagcggccgtggcaatgctttcctgtccgggcccctggtgttgccttccggc
gtcacgctctgggtcgacgacggcgtgaccctgttcgccagccgcgacgtggtggtgtat
gacaaggcgccgcaagaccggcccaaccccatcacctgtggcgccgcggtgaacaaccca
gccgggcttccagcccccgcagggaccgtcaatgccggtcaagccacgctggccggggtt
agcggcatgcagaactgctatccgctgatacgcggcaaccacacggtcaatgccgcgatc
atgggtacaggctcgatcgacgcacgtggctacatgccgctgatcagctcgtcgtcgctt
tatccgacgatccgctgggcaaccggtgcgaccgagaagttcacctattcaggcaacaat
atcaccggcgtcgtgacgcccaagttcagctgcacgaacacgattgccgcttatcgcgcg
ggcaccctcgcccccgaaggaacggcctgcgacgtggtcaccgcgatgggcaccgcgacg
ctcaccacaccggccgtcacctatgtggtcaaccggcaggcgaccagtgtgccgagcggc
gtgacggtcaatagtcctggatgtgccagcggcacggctggctgcgcgcgttgggtgccg
gctagctggtgggacgtcgcgtaccacggcaacaaggacattggcggtggcccgtacagc
ttccagggcaatcccggcatggtctggctgcagcagtccaagaacctgaccctgtatcag
atcacgctgcgcaacagcaccttcttcaccgtcgaagccgacggcgtggacggcctgacc
gcgtggggtatcaagatcattacgcctctgctgcccgacgcagctaacctggccagcgtt
ggcttgaacaatgacggctttgatggggttaacggctcgtattcgcacctctatacgggc
gcccagatcagtgccagttcgaccggcgtgaaaaacaccgatggtatcgaccccagcgtt
gcaaacggaccggagcacgcgagcctcggcacgggcagcaagacgacctcgggcagcccg
atttactttgacggctatgttaagaacgtggcgattgtgtacaactacctgagtccttcg
gacgacaacgttgccttcaagggtggtttgcccgatccgcgcgtcgctggagctaaaggt
gcccagaacggctcgcctgccgccaacatgctgtggggcatcgacggcaaccgtgacgtt
tcgtcgaaccgcacgtacggcattaccgttgcgcacaaccacgactacaacggccatggc
ttgtcgatcggcagcccgaccaatgcgggtgtccgtaacattcacttctacgacaactat
ttcgacagcatctacgacggcaccaacgctgcaacggacatgggcgtagtcggcctgcgt
atcaagagcggccaggcgcgcggcggcgacgtcagcaacatttactatgacggcgcgtgt
atgcgtggaatcggtagtttcctagtattcgacatgtactacacggatcctgccgcggat
ccgatttcgtacaccgggcttggctggcagccccccagcttccatgacatcaacgtcagc
aatgtccgcatgatgaacatcccgagcaataaggcagccgggaaggctggcgctggcagc
ctgacgttccgcggtctgcatgccgacaccagcttcgccaatacgcaaagcgtcattcaa
ctgagcatgaataacgtggtcgcggataacgacgtcgcgctgagcatttcgaacctgagc
aagggtgtggtgaacattggctccaccgacggctcttcgcaatcgaaggctgccaacgcc
acgttgaacctgggcgcaaatgttagcctgctgggccagtcatttgctcacggtacgggc
ggcatcctgacgaatacgagcagtggcgcggggaaatataccgcgcccacgaatacgctc
aacctgaccgtcaatggcagcgatgatgctggatctgcaaccgacacgaatcctgcggcg
accatcgtctcccagaatccgaagctgtcgctttgcgataacccggcatcctggcccacc
ttccccaacgtgaagtaa
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