Pedobacter gandavensis: QG516_00420
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Entry
QG516_00420 CDS
T09013
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgj03000
]
QG516_00420
Transcription factors [BR:
pgj03000
]
Prokaryotic type
Helix-turn-helix
LacI family
QG516_00420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
MarR
HTH_10
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
WGQ10117
LinkDB
All DBs
Position
107727..108752
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AA seq
341 aa
AA seq
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MKRQKRTTIYDIAEKLNLAASSVSRALSNSDKINAETKALVLKTAAEMNYQQNAMASNLR
KGSNPTIGVVVPRINQYFFSNIIAGLEEVTFNKGYNLVICQSNESHEREVEVVNTLINQN
VSGIVISIAAETGSSDHLQQVLDRNIQLIQFDRVVEDLETFKVLNDNYKASYDAVTHLIE
QGYRRIALLEGPQELHIFRERKEGYIAALKAGGFPILEELMYANAWTKELGAQATAELLE
MASPPDAIFASTSDFAALGVLEAATGKGIRIPEELGICGYSNEPFTEITSPSITTIDQFS
IEMGKTIGNLHFQELINSGMVIKKTVNIRPKLIVRKSSQRV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgccagaaaagaacaacgatatacgatattgctgaaaagctcaatttagcggcc
tcttccgtgtccagagcgctgagcaatagtgataaaattaatgcggagacgaaagcatta
gtgcttaaaaccgctgctgagatgaattatcagcaaaatgcgatggcttccaacctgcgg
aaaggcagtaatcccacgattggcgtggtggttccccgcatcaaccaatatttcttttcc
aacattattgctggcttagaagaagtcacttttaacaaaggttataaccttgtcatttgc
cagtctaacgaatctcatgagcgtgaagtagaggtagtgaacaccctgatcaatcagaat
gtaagtgggattgtgatttctatagctgcagagacaggcagttcagaccatttgcagcag
gttttagaccgtaacattcagttgattcagtttgaccgtgtagtggaagacctggaaaca
tttaaagtgctgaacgacaattacaaggcttcttacgatgcggtaacccacctgattgag
caaggctaccgcaggattgccttattggaaggcccgcaggagctccatattttcagggaa
agaaaggaaggctatatcgcggcattgaaagccggtggcttcccgatactggaagaactg
atgtatgccaatgcctggacaaaagagcttggtgctcaggctactgctgaattactcgaa
atggccagtccaccagatgcgatattcgcatctacttccgattttgccgctttaggagtg
ctagaagcagctacaggaaagggaatccgcattccggaagagctgggcatctgtgggtat
tccaatgagccttttacagagattaccagcccatcaattaccactatcgaccagtttagc
atagaaatgggaaaaacgataggaaatcttcattttcaggagctgataaattcaggaatg
gtgatcaaaaagacggtcaatatcaggccaaagctgattgttagaaagtctagtcagcgg
gtttaa
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