Pedobacter gandavensis: QG516_01065
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Entry
QG516_01065 CDS
T09013
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00550
Peptidoglycan biosynthesis
pgj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QG516_01065 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pgj01003
]
QG516_01065 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgj01011
]
QG516_01065 (pbpC)
Enzymes [BR:
pgj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
QG516_01065 (pbpC)
Glycosyltransferases [BR:
pgj01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
QG516_01065 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
pgj01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
QG516_01065 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
WGQ10241
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All DBs
Position
271946..274339
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AA seq
797 aa
AA seq
DB search
MFKKLVYEPKLFISDLLCLFLLLWFWFLLPSKLFLSPTSYVVEASNGELLSAAIAKDGQW
RFPVADTIPLKFQQCIVAFEDQRFYQHPGVDILAMARAMQQNFKAKAVVSGGSTLTMQVI
RLSRRESRTVWQKIVEVIMAARLEFSNSKEDILKLYAANAPFGSNVVGLDAASWRYFARS
PESLSWGEMATLAVLPNSPSLVHPGKNSVKLIKKRNDLLDKLASLKIIDQETANLSKLEP
IPGKPLALPQNAPHLLQRFKVERAQLEIPVTRITSTLDYNLQLKVSNLLKRYQNRYQAND
INNIAALVLNVKTGTVQSYVGNIYQPDHKELQSHVDMIKAPRSPGSTLKPLLYASMLNDG
FILPRTLIPDIPTQINGYSPQNYDLGYDGAIPADRALSRSLNIPAVKMLQNYKYQRFYDQ
LKKLGIKTLNKPADHYGLSIILGGSEVTMWDLAKTYMGMARTLNHFNDYQGRYNPQDYDA
PVYIQQAAAKPRFAQEDAEINGTLDYASIWNTFNAMEELMRPGEEGLWEQFSSSQRVAWK
TGTSVGSRDAWAVGLTPGYVVCVWVGNANGEGRPGLTGVDIAAPVLFDIFRELPNEKWFT
TPKHQLRKMRVCKQSGYKAGEYCREIIEELVPPAAEKTSICPYHKLIHLDRTGTYRATDE
CESTAMMLHQPWFILPPAMEYYYKVKHSDYKLLPAFMPGCGNAGSNFVMEMIYPKPNAQI
YIPLELDGTRGKVVFNVSHRNTNAKIYWHIDEEYVGTTKNFHQLALNPAPGKHTLTLVDE
DGERLVQSFTILSKEKD
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaaattagtttacgaaccaaaactattcatcagcgacttgctctgcctgttt
ctgctgctctggttttggttcctcttgccatcaaagttatttttaagccccacttcttat
gtggttgaagcctccaatggcgagttgttaagtgcagctattgcaaaggacggccagtgg
cgatttccggttgcagacaccattcccctaaaatttcagcagtgtattgtcgcttttgaa
gaccagcggttctatcagcatcccggtgtggatattttggcgatggccagagctatgcag
caaaattttaaggccaaagccgtggtgagcggtggcagtaccttaacgatgcaggtgatc
cgtttgtccagaagagaaagccgaacggtatggcagaaaatagtggaagtcatcatggct
gcccgattggagttcagcaactcaaaagaagacattttaaaactttatgccgccaatgcc
ccttttggaagcaatgtggttggactggatgcagcttcctggcgttactttgcccgaagt
ccggaaagtttatcctggggagaaatggctaccctggccgtgctgccaaatagtccttct
cttgttcatccaggcaaaaattccgttaaactcatcaaaaagcggaatgacctgctggat
aaactggcatccttaaagatcattgaccaggaaacagccaatctttctaaattagagcct
attcctggaaaaccattggcattgcctcaaaatgcgccgcacctgctgcaacgctttaaa
gtagaaagggcgcaattggaaatcccagttacccggatcacttctacgcttgattacaac
ctgcaattgaaagtcagcaacctgctgaaacgctatcaaaacaggtatcaggccaacgac
atcaataacattgcagcactggtgctgaatgtgaaaacaggtacagttcaaagctatgta
ggcaatatttatcagccggatcataaagaattgcaaagccacgtagacatgattaaagcg
ccaagaagtcccggcagtacactgaaacctttactttatgccagtatgctgaatgatggg
tttattttaccccgcaccttaattcctgatattcctacgcagattaacggctactcgcct
cagaattatgatttgggctatgatggtgccattccagcagatcgggccctgagtcggtcc
ttaaacatccctgcagttaaaatgctgcaaaactataagtatcagcgcttttatgatcag
ctgaaaaagctcggtataaaaactttgaataaacccgctgatcattatggcctgtctatc
atccttggcggaagtgaggtcacgatgtgggatctcgctaaaacctatatgggtatggcc
aggactttaaatcattttaacgattaccaggggcgctataatccgcaggattacgacgcg
ccagtttatattcagcaagcggcagctaaacctcgttttgcgcaggaagacgctgaaatt
aatggaacactggattatgcttccatatggaatacttttaatgccatggaagagctgatg
agacctggtgaggaaggactttgggagcagttttcttcttcccaaagggtggcctggaaa
acgggtaccagcgtaggttccagagatgcctgggccgttggcctgactccaggatatgtg
gtttgcgtatgggtgggtaatgcaaatggtgaaggcagacctggtttaactggtgtagac
attgctgcgccggttttattcgatattttcagggaacttccaaatgaaaaatggtttact
acgccaaagcatcagctgcgaaaaatgcgggtatgtaaacaaagtggctataaggccgga
gaatattgcagggaaatcatagaagaattggtgccgccggcagcagaaaagaccagcatt
tgcccttaccataagctgatccatctagacagaacggggacttatcgcgcaacggatgaa
tgtgaatcgacggccatgatgctgcatcagccctggtttatccttccccccgccatggaa
tattactacaaggtgaaacacagtgattacaaactgctgcctgcctttatgcctggctgt
ggtaatgcgggaagtaattttgtgatggaaatgatctatcctaagccaaatgcgcagatt
tacattcccctggagttggatggtaccagaggtaaggtggtgttcaacgtttctcaccgc
aataccaacgcaaagatttactggcatattgatgaggaatatgtgggtacaacgaagaat
tttcaccagctggcattgaatccggcgccagggaaacacaccctgacgcttgttgacgaa
gacggggaaagactggtgcagtcctttacgatcctcagcaaagaaaaagattaa
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