Pedobacter gandavensis: QG516_01130
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Entry
QG516_01130 CDS
T09013
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QG516_01130 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgj03400
]
QG516_01130 (xseA)
Enzymes [BR:
pgj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
QG516_01130 (xseA)
DNA repair and recombination proteins [BR:
pgj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
QG516_01130 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WGQ10254
LinkDB
All DBs
Position
complement(286007..287380)
Genome browser
AA seq
457 aa
AA seq
DB search
MSTIPSIKLSELTRQIQQAIDGVFGQQTFWIIADITNYTYKPQSNYHYFELVEKDKNAAR
ILAKVAGRAWGNASLNITNFEKATGQKFKNDINVLVQVSVQYNPAFGLQLNLLDIDTNFT
LGLFEQQRKETLERLLRDNPGFIQKAGDRYLTRNNSLTFRPVIQRIAVISSDTSAGFQDF
RHSLEHNPFGYKFEIDDYFALVQGDGNAKQFLAQIIAVYESKKPYDALIIIRGGGSQTDF
LLYDNYELNRAIAKFPIPVITGIGHQKNETIADLMAHTSTKTPTKAAEFIISHNRNFEDR
LTDIQKMILIKTYQMINHHKDRLVQLNQSTINTSRQLLHGHHNHILQLSGLILTNPRILI
SNKRKDLSNLTQNMQSYSRMYFLNKTGNIAHFQSVMRIMSPQNILNKGFAILKVNGKIIS
NADQISIGEELTIRLADSEIKTTVKSKSAYDENEFNL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaccatcccttccataaaactgtccgaactaacccgccagattcaacaggcaatt
gatggtgtttttggacagcagactttttggatcatcgccgatattaccaattatacctat
aagcctcaaagcaattaccactattttgagctggtagaaaaagataagaatgccgcaagg
attctagcaaaagttgccggaagagcctgggggaatgcttcgctgaatatcaccaatttt
gaaaaggctaccggacagaaattcaagaatgacatcaatgtattggtacaggtatccgtt
caatataaccccgcatttggattacagctcaacctgctggacattgatacgaatttcaca
ctcggtttattcgagcagcagcgtaaagaaacactggagcgattgcttcgggataacccc
ggtttcatccaaaaggcaggagatcgctacctgaccagaaacaacagtttaacgtttaga
cccgttatccagcggattgcagtgatctcttctgatacctctgcaggattccaggatttc
aggcatagtttagagcacaatcctttcgggtataaatttgaaatcgacgattattttgcc
ttggtgcagggcgatggcaatgccaaacaattcctggctcagattattgccgtttatgaa
tctaaaaagccttatgatgccttaattatcattaggggtggcggttcacagactgatttc
ctgctgtacgacaattacgaattgaaccgtgcgatcgctaaattccctattccagtcatc
accgggatcggacatcaaaaaaatgaaacgattgctgatttaatggcccatacttctacg
aaaacgccaactaaagctgcagagttcatcatctcgcacaaccgtaattttgaagaccgc
ttaaccgatattcaaaagatgatcctcatcaagacttatcaaatgatcaatcaccataaa
gaccgactggtgcaactgaatcaatccaccattaataccagtcgccagctcttacatggc
caccataaccacatcctgcaattgtctggactgatcctgaccaacccaaggatcctgatt
tcaaataaaagaaaagacctgagcaacctgactcaaaatatgcagtcttacagcaggatg
tattttttgaacaaaacaggcaacattgcccatttccagtctgtcatgagaatcatgagc
ccgcaaaacatcctgaacaaaggttttgcaatcttaaaggtaaatggaaaaatcatcagt
aatgcggatcagatcagcataggggaggaattgaccattcgattggccgattcagaaatc
aaaacaacagtaaaatcaaaatcagcatacgatgaaaacgaatttaacttatga
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