Pedobacter gandavensis: QG516_01620
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Entry
QG516_01620 CDS
T09013
Name
(GenBank) glycoside hydrolase family 88 protein
KO
K15532
unsaturated rhamnogalacturonyl hydrolase [EC:
3.2.1.172
]
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
QG516_01620
Enzymes [BR:
pgj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.172 unsaturated rhamnogalacturonyl hydrolase
QG516_01620
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_88
DUF4350
LBP_M
Beta-AFase-like_GH127_cat
GlcNAc_2-epim
Glyco_hydro_76
IFT52_GIFT
Motif
Other DBs
NCBI-ProteinID:
WGQ10351
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Position
complement(406823..408772)
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AA seq
649 aa
AA seq
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MKITWINTAAAVLLLQASYAPVANAQANKPLSARMAATVMEIWADSLNLNPEQPKPVKWA
YDQGVILEGIDGLWKRTGKGEYFKYMQKSMDFFVTKDGVIQRYKPQDYNIDNIKNGRSLL
TLYKVTGQVKYFKAATALREQLKGHPRTKEGGFWHKKIYPSQMWLDGLYMGQPFYAEYAA
LVGDQAAFDDIANQFILMEKYSKDPKTGLLYHGWDESKEQKWANPVTGQSPNFWGRAMGW
YAMALVDALEYFPKDHPKRKELQAILNRTAVAIKKYQDPKSGLWYDILDKPNAKGNYPEA
SASAMFVYSLAKGVRTGDLSNIYLAVAEKAYRGMGKVFVEQVSADRVNLKGTVSVSGLGG
KPYRDGSFAYYMSEPVITNDPKGVGAFLLAANEMEWAASAKPGQGKTVLLDNYFNHEIKK
DQSGNDLSWHYKWAERANGGFSMWGGIFERNGFKTKELDEGPTLKNLSDAAVYIIVDPDT
EKESPKPNYIEVNHIKDLTAWVKAGGLLVLMANDTGNTELDHFNQLAKPFGIQFNKDSKG
RVNKNEYETARIDIPARNSIFKNSKQLFVKEFSSLSLSSPAVAIVKDSAGNNVIAISKYG
KGTVFVIGDPWLYNEYVDGRKLPADYDNFAAATDLVQWLSQQLPSNLTK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataacctggataaatactgcggctgctgtgctgctcctgcaggcaagctatgct
cctgtagccaatgcgcaggcgaataagccgctctcagcgcgtatggcggctacagtaatg
gaaatatgggcagattcactgaaccttaatcctgagcagcctaagcctgtaaaatgggct
tatgaccaaggggtgatcttggaaggaattgatgggctttggaaaagaaccggaaaaggc
gaatatttcaaatatatgcagaaaagcatggacttttttgtgacaaaagacggagtgatt
caacgctataagccacaggattataatattgacaatatcaagaatggtcggtcgctgctg
actttatacaaagtaaccggtcaggtgaaatattttaaagcggctaccgcattaagggag
cagctaaagggtcatcctagaaccaaagaaggcggtttctggcataaaaagatttatcct
agtcagatgtggctggatggcttgtacatggggcagcctttttatgcggaatatgccgct
ttagtaggtgatcaggctgcttttgacgacattgcgaatcagttcattctgatggagaaa
tatagtaaagatccgaaaactggtttgctatatcatggatgggatgaatctaaagaacag
aaatgggcaaatccggtgacgggacaatcgcctaatttctggggaagggcaatgggttgg
tatgctatggctttagtagatgccttggaatatttccctaaggaccatccaaaacgaaaa
gaacttcaggcgattttaaacaggacagccgtagcgatcaaaaaatatcaggatcctaaa
agcggactctggtatgatatattagacaaacctaatgcgaaaggaaactatccggaagct
tctgcttcggcaatgtttgtgtatagcctggctaagggggtgaggactggtgatttgtct
aacatatatcttgctgttgcagagaaggcttatcgcggtatgggtaaggtatttgtggag
caggtttccgcagacagggtaaacctgaaaggtaccgttagtgtttccggtttaggcggc
aaaccttaccgtgatggtagttttgcttattacatgagcgagccggtcatcaccaatgat
cctaaaggtgttggcgcatttttactagctgcgaatgaaatggagtgggcagcatcagca
aaacctggtcaaggaaaaacggtgttgctcgacaattactttaaccatgaaatcaagaaa
gaccaaagtggaaatgacctgtcctggcattataaatgggcagaacgggcaaatggcggc
ttttctatgtggggtggtatctttgaaaggaatggtttcaaaactaaagagttggatgaa
ggaccaaccttaaaaaacctcagcgatgctgcagtatacattattgttgacccagataca
gagaaagaaagcccaaagccgaactatattgaggtaaatcatatcaaagacctgactgcc
tgggtgaaagcagggggcttattggtgctgatggcgaatgatactggaaatacggaattg
gatcattttaatcaactggctaaacctttcggtatacagttcaataaggatagtaaaggg
cgggtaaataagaacgaatatgaaactgctaggatcgatattcctgcaagaaattctatc
ttcaagaattcaaagcagttgtttgtgaaggagtttagtagtctttcattaagtagtcct
gcagtagcgattgtcaaggatagtgccgggaataatgtcattgcgatctctaagtatggc
aaagggacggtcttcgtaattggcgatccctggttgtataatgagtatgtagacggtcgg
aaattgccagccgactatgataattttgctgcagcaacagacctggttcaatggcttagt
cagcagttaccttctaacttaacaaaatga
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