Pedobacter gandavensis: QG516_01945
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Entry
QG516_01945 CDS
T09013
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
pgj
Pedobacter gandavensis
Pathway
pgj02010
ABC transporters
pgj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
QG516_01945
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QG516_01945
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgj01002
]
QG516_01945
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgj02000
]
QG516_01945
Peptidases and inhibitors [BR:
pgj01002
]
Cysteine peptidases
Family C39
QG516_01945
Transporters [BR:
pgj02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
QG516_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_21
AAA_29
RsgA_GTPase
AAA_23
AAA
AAA_16
AAA_30
DLIC
nSTAND1
DUF3987
AAA_25
SbcC_Walker_B
ATPase
DUF87
Motif
Other DBs
NCBI-ProteinID:
WGQ10415
LinkDB
All DBs
Position
complement(495987..498143)
Genome browser
AA seq
718 aa
AA seq
DB search
MSIKVKQRDITDCGAACLASIASHYKLDLPVARIRQFAGTDKKGTNVLGMVEAAQKLGFE
AKGVKGPFDSLFKIPKPAVAHLIVKEVLQHYVVIYKVTSKYVEVMDPIDGQMHRRSHEEF
KKEWTGALVLLLPSEDFQTGNEKGSIAGRFWSLIKPHKGILLQALFGAIVYTILGLSTSV
FVQKLVDFVLVDGNRNLLNLMSIGMVIILAIQLFIGTAKTIFTLNTGQMIDAQLILGYYK
HLLRLPQQFFDTMRVGEIVSRINDAVKIRTFLNDVSINFLVNIFIVVFSFIMMFTYYWKL
ALLMLAVIPLYLLIYLITDKLNKKAQRTLMEDAAELESQLVESLNAVGTIKRFGLESFAN
EKTEIRFVKLLKDSFKSNMNSVFSGTSSELTSRLLTIILLWVGAGYVIDSKITPGELLSF
YTLIGYFTGPVSSLIGMNKTVQDAVIAADRLFEIMDLERESEESQIELSPDKIGDIHFED
VSFRYGTRIAVFEHLNLTIPSGKFTAIVGESGSGKSTLMSILQNIYPIQSGNVSIGQYDL
KYISNSSLRRLVAVVPQQIDLFAGNVIENIAIGDYEPDLQKIIDICTQLGLIGFIESLPK
GFQTYLGENGASLSGGQRQRIAIARALYREPEILILDEATSSLDSAAEKYVQKMIDILKG
KDKTVIVIAHRLSTLSNADKIIVLDKGLVVEEGSHQELRHNPNSAYANLWKLQVPEEV
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcaaagtaaaacaacgggacatcaccgattgcggggcagcttgtttagcttca
attgcatcacattataagttagatctgccagtggccagaatcaggcaatttgctggtaca
gataaaaaaggaaccaatgtgctgggaatggtagaagccgcccaaaaactaggctttgag
gctaaaggcgtaaaaggcccctttgatagcctgttcaaaatcccaaaaccggcagtagca
cacttgattgtcaaggaagtgctgcagcattatgtggtcatctataaagtgaccagtaaa
tatgtagaagtcatggatcctatcgacggacaaatgcaccgccgcagccatgaagaattt
aaaaaggagtggactggtgccctggtactgctgctgccatcagaggattttcaaacagga
aatgagaaaggatccatcgctggtcgcttttggagcctgattaagccacataaaggaatt
ttattacaagccttatttggtgcaatagtctataccatcctaggcctttctacttctgtt
tttgtacagaaactggtggattttgtattggtagatggtaaccggaacctgctcaacctg
atgagtataggtatggtgattatccttgccatccagctctttatcggcacagccaaaaca
atttttacgctcaacaccgggcagatgattgatgcgcagctgattttggggtattacaag
catttactgcgattgccacagcagtttttcgataccatgcgtgtcggagaaattgtttcc
aggatcaatgacgccgtaaaaataaggacctttctgaacgatgtcagcatcaacttccta
gtcaatattttcattgtcgtgttttcatttatcatgatgtttacctactactggaaactc
gcattgctgatgctggcggtaattccactgtacctgctcatctatttgataaccgataaa
ctgaataagaaagcgcaaagaactttgatggaagacgctgcagaactggaatctcaattg
gtagaaagtttgaacgcagttggaacgattaaaagattcggactggaatccttcgctaat
gaaaaaacagaaatccgctttgtaaaactgcttaaagatagttttaagtcgaacatgaac
tccgtgttttcgggtacttcttctgaactgacctcccgtttactcaccattatcttatta
tgggtaggtgcgggttatgtaatcgacagcaagattacacccggagaactcttgtccttt
tataccttgatcggatattttaccggcccggtttcctccctgatcgggatgaataaaacg
gtgcaggatgccgtgattgcagcagataggctgttcgaaatcatggacctggaacgtgaa
agtgaggaaagtcagattgaactaagtccagataaaataggagacatccatttcgaagat
gtttccttccgttatggcactaggatcgctgttttcgagcatttaaatttaaccatccca
tctggtaaatttaccgcaatcgtaggggaaagcggctctggaaaatcaacgctaatgtcg
atcctgcaaaacatttatcccattcaaagtggcaatgtcagtattggtcaatacgacctg
aaatacatcagcaattcctctctgcgcagattggtagctgtggtaccgcagcaaatagat
ttatttgcaggaaatgtaattgaaaacattgccataggcgattatgaacctgacctgcaa
aagatcatcgacatttgtacgcaattaggtctgattggttttatagaatctttgcctaaa
ggttttcagacttacctgggagagaatggagccagtctttccggcggacaaagacagcgg
attgccatcgcaagagcgctgtatcgggagccggaaattctgatcctggatgaagccact
tcttcgctcgattctgctgctgaaaagtatgtacagaaaatgatcgatatactgaaagga
aaagataaaacagtaatcgtgattgcccaccgcttaagcacactcagcaatgcggataaa
atcattgtgctcgataaaggattagtagtagaagaggggagccatcaggaattaaggcac
aatccaaattctgcttatgcgaacctatggaaactgcaggtgccggaagaggtgtaa
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