Pedobacter gandavensis: QG516_02730
Help
Entry
QG516_02730 CDS
T09013
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QG516_02730 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgj03400
]
QG516_02730 (xth)
Enzymes [BR:
pgj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
QG516_02730 (xth)
DNA repair and recombination proteins [BR:
pgj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
QG516_02730 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
FANC_SAP
prePAAR_I
Motif
Other DBs
NCBI-ProteinID:
WGQ10569
LinkDB
All DBs
Position
complement(677912..678697)
Genome browser
AA seq
261 aa
AA seq
DB search
MKIATYNINGIKGRLSNLLRWLAQAQPDVVCLQELKCEQQHFPESAIQEAGYHSIWKGEK
SWNGVAILSKEPIRQLRDDLPGADDSFTHSRYLEGFTFGMVIGCLYLPNGNPYPGPKFEY
KLRWFKRLAAHGKTLLATKLPVMLIGDYNVIPTELDTYKPEKYVDNALFRKEIRAAFARL
VAQGWTDALRELYPTERIYTFWDYMRNAYGRDAGLRLDHFLLNQAVADRLLSAGVDKEVR
GWEKSSDHAPVWIELLESRKT
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgcaacttataacatcaatggcatcaaggggcgcctgagtaatttacttcgc
tggctggctcaggcgcagccagatgtggtgtgcttacaggaactgaaatgtgaacagcag
cattttccggagtccgcgattcaggaggctggctatcattcgatttggaaaggcgaaaaa
agctggaatggggtagcgatcttatcaaaagaaccaatacggcaattgcgggatgatttg
cctggagcggatgactcctttacgcacagccgatacctggagggcttcacattcggaatg
gtcataggctgtttatatctgcccaatggcaacccttaccccggacctaagtttgagtat
aagttgcggtggttcaagcgccttgcagcgcatggaaaaaccttactggcgacaaagtta
cctgtgatgttaatcggggattacaatgtcatccctactgaattggatacctataaacca
gaaaaatatgtcgacaatgcattgttcagaaaggagatcagagctgcttttgccaggctt
gttgcgcaaggctggacagatgcgcttagagagctgtaccctacagaaaggatttatacg
ttttgggactacatgcggaatgcttatggacgggatgccggattgcggctcgatcatttt
ttattaaatcaggcagtggccgacaggctattgtcagctggcgtggataaagaagtgcgt
ggctgggaaaagtcaagtgatcatgcaccagtttggattgaattgctggagagcaggaaa
acgtaa
DBGET
integrated database retrieval system
