Pedobacter gandavensis: QG516_03125
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Entry
QG516_03125 CDS
T09013
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgj02000
]
QG516_03125
Transporters [BR:
pgj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
QG516_03125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
SusD-like
PI-TkoII_IV
Motif
Other DBs
NCBI-ProteinID:
WGQ10648
LinkDB
All DBs
Position
complement(775719..777242)
Genome browser
AA seq
507 aa
AA seq
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MKKLYIMISAAILSLSACTVEEEILDEVNGGKVIHNPENVEMIVAPAYAYLRDLQNRSGV
WGTIQSVTDELAWPARGSDWVTPDLQALFTHDYAPTNSYVRNTWNSFMLGITRCNVALKY
LSEFPKSPKVDGYIAEVKFIRALCMFRLTDNFGKFPFREFTETDYSKVPVILDRQMAVDR
MIKELNEVIPQLKSKSEIPYGRVSKAAAQMLLANVYLNHEVFTGTAKWTEAVQQCDAIIN
SGQYTVADDYWGMFQYDNAKYLQNTESILSVIYDETIGLTGSVWVPITLHYNQKFGSFTS
LWNGCCTTPTFVNTWDTSDKRFSDKRLISQLGFNQGFLIGQQYSPTGVALKTRTGAPLVF
TKEFSIKNSKEEEGVRVVKFAPNPSTTNTSNAGNDFPLYRLSDTYLMRGEAKFRSGNLSG
ALEDINYIRNTKRGMPAYTSLDLDKILKERGFELYWEGNRRTDLVRFNKYRDAREEKNYV
TPAYKVLLPIPLSAIEANASLTQNPGY
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattatatatcatgatcagtgctgccattttatcgcttagcgcatgtaccgtg
gaggaagagattctggatgaggtgaatggtggtaaagtgatccataacccggaaaatgtg
gaaatgattgtggctccggcatatgcttacctcagggatttacagaaccgttctggagtt
tggggaacgattcaatctgtgaccgacgagctggcttggccggcaagaggatcggattgg
gtaacaccggatttgcaggctttatttacccatgattatgcacctaccaactcttatgta
agaaatacatggaacagctttatgctgggcatcacccgttgcaatgtggccttgaaatac
ctatcggaatttcctaaatctccaaaagtagatgggtatatcgctgaggtgaagtttatt
cgtgccctatgcatgtttagattgaccgataactttggtaaattccccttcagagagttt
acggaaaccgattattcaaaagtaccagtgattcttgaccgtcagatggcggtagaccgg
atgatcaaagagttgaatgaggtaattcctcaattgaaaagtaaatcagaaatcccttat
ggcagggtgtctaaagctgcagctcagatgttattggctaacgtttatttaaaccatgaa
gtgtttacaggaacagcaaaatggacggaagcggtacaacaatgcgatgcgattattaac
tccggacagtatacggtggcagatgattactggggaatgttccagtacgataatgcgaag
tacctgcaaaatacagagtctattctttctgtgatttatgatgaaaccatcggacttacg
ggctcggtatgggtcccaattaccttacactacaaccaaaagtttggcagttttactagc
ctttggaatggttgctgtaccacaccaacattcgtgaacacctgggacacttcagacaaa
aggtttagcgacaaaaggctgatcagccagttaggctttaatcaaggttttttgatcggt
cagcagtattctcctaccggtgtagctttgaaaacacgtaccggtgcgccattggtattt
accaaggaattcagtatcaaaaattctaaggaagaagagggcgtaagggtcgttaaattt
gcaccaaacccatctaccaccaataccagtaatgcaggtaatgattttcctttatatcgc
ctttctgatacctacctgatgcgcggggaagcgaaattcaggtcaggtaaccttagtggt
gctttagaagacatcaattacatcagaaataccaaacgtggcatgccagcctacacaagt
cttgatctggataaaatcctgaaagaacgaggttttgaattgtattgggaaggtaacaga
cgtacggatctggtacgtttcaataaataccgtgatgcgagagaagagaagaactatgta
actccagcttacaaagtactcctgccaattccgcttagtgcgattgaagcgaatgccagc
cttactcaaaatccaggttattaa
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