KEGG   Pedobacter gandavensis: QG516_03340
Entry
QG516_03340       CDS       T09013                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
pgj  Pedobacter gandavensis
Pathway
pgj03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pgj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    QG516_03340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgj03400]
    QG516_03340
DNA repair and recombination proteins [BR:pgj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     QG516_03340
SSDB
Motif
Pfam: Ku GCS
Other DBs
NCBI-ProteinID: WGQ10688
LinkDB
Position
complement(819026..819799)
AA seq 257 aa
MRSIWKGTIGFGLVSIPMKLYSAVQTSSLDLDMLDGRDHAHIKFQRINENTRKEVPYDKI
VKGYLYKDDSYVIVEESDFVAAAPEKTKTIEIESFVDIASVNPMFYETSYYAEPEAKSNK
AYALLLQVLKKSKKAGLARFVLRNTESLCIVHPVGAALVVTRIRFQQQIRDAGDLKIDDK
ITINKKELDMGLALVNQYAEDFDVSKYEDTYQKKLLKLIEAKAKGKRPTIKKLKPRKDKE
DDLYSQLMGSLNAKKGA
NT seq 774 nt   +upstreamnt  +downstreamnt
atgagatcaatttggaagggaaccattggctttgggttagtcagtatcccaatgaaatta
tattccgcagttcagacatcgtcactggatttggatatgcttgacgggcgtgaccatgcg
catattaagtttcagcggatcaatgaaaacacacgtaaggaagttccctatgataagatt
gtcaaggggtatctttataaagacgacagttatgtgattgttgaagaaagtgattttgtg
gcagcggcgcctgagaaaactaaaaccattgagattgaaagttttgttgacatcgcttcg
gtgaatccaatgttttatgaaacatcatattatgctgagcctgaagccaaaagtaataag
gcttacgcactgttattgcaagtattaaaaaaatcaaagaaagctgggctggctcggttt
gtattgcgtaataccgaaagtttgtgtattgtacatcctgtaggtgcggcactggtagta
acgcgtattcgttttcaacaacagatccgtgatgcgggggatcttaagatagatgataaa
atcactatcaataaaaaggaactggatatgggactggctctggtgaatcagtatgcggag
gattttgatgtttctaaatatgaagatacctatcagaaaaagttgttgaaacttatcgag
gctaaagctaaaggcaaacgacctactattaaaaagttgaaaccgcgtaaagataaagaa
gatgacttgtacagtcaattaatgggtagtttaaacgccaagaagggagcctga

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