Pedobacter gandavensis: QG516_04020
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Entry
QG516_04020 CDS
T09013
Name
(GenBank) IS3 family transposase
Organism
pgj
Pedobacter gandavensis
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Gene cluster
GFIT
Motif
Pfam:
rve_2
rve
rve_3
HTH_21
HTH_Tnp_1
HTH_23
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WGQ10820
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Position
complement(join(954085..954992,954992..955262))
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AA seq
392 aa
AA seq
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MSRERKSYPKEFKLMSVELSNTRSDLPALAKELDITPQILYRWRKEFSAKQGSSFPGNGK
VILTETEQELSRLRKELRDTQMERDILKKAGRHLLQERQQIFGFIKNHTEIFPVEKMCTV
FKVSRGGFYAWMKSIPSNRSIENQMLDLEILEAFVNSKKIYGSPRITRELHKKNIKVSRV
RVARMMKRAKLRSIVKKKFKVTTDSSHKFPVPENILDRDFKPGILGAAWVSDITYIRTKK
GWLYLTTVIDLGDRKIIGWALSVTMKAIDTVIPAFKMAQKTRPITQELIFHSDRGVQYAC
NEFRSLLGKNPFIIRSMSRKGNCWDNAVAESFFKSLKAECVYQHKFTDKEQAALIVFEYI
EIWYNRNRLHSALGYLSPEEFGRNLNKQNIAA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgagaaagaaagtcgtacccgaaggagtttaagctgatgagcgttgaactgagt
aatacccgatctgatttgcctgctttggcaaaagaattagatattacaccccagatatta
taccgctggaggaaagaattttcagcaaaacagggaagtagttttcctggcaatggaaaa
gtgatattaactgaaaccgagcaggaactttcaagattgaggaaagaactgcgtgataca
caaatggaacgcgatatcctaaagaaggctggtcggcatcttctccaagagcgacaacaa
atattcgggttcataaagaaccacacagaaatatttccagtcgagaagatgtgtacggta
tttaaagtaagtagaggtggtttttacgcttggatgaagagtattccttcaaacagaagc
attgaaaaccaaatgcttgaccttgaaatactggaggcttttgtgaatagtaaaaagatt
tatggcagtcccaggattactcgtgaactccataaaaagaatattaaagtatccagggtc
agagtagccagaatgatgaaaagggcaaaactgagaagtattgtaaagaaaaaatttaag
gtcaccactgattccagtcataaatttccagtaccagaaaatatactggatcgtgatttt
aagccagggattttgggagcagcctgggtatctgacattacttacatcaggaccaaaaaa
ggctggttgtacctgactactgtgattgatcttggtgataggaaaataattggctgggca
ttaagcgtgacgatgaaagcaattgatacggtgatacctgcgtttaaaatggctcaaaag
acaaggcctataacgcaggaactgatctttcattctgatcgtggagtgcaatatgcttgt
aatgaattcagatctttactcgggaaaaatccgttcatcatcagaagtatgagcagaaaa
ggaaattgttgggacaatgcagtggctgagagcttctttaagtcactcaaagcagaatgt
gtataccagcataaatttacagacaaagagcaggcagcgctgattgtatttgaatatata
gagatctggtacaaccgtaacagactacattctgcactgggatatttatcccctgaggaa
tttggaagaaacctaaataaacaaaatattgcagcttaa
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