Pedobacter gandavensis: QG516_04100
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Entry
QG516_04100 CDS
T09013
Name
(GenBank) sialidase family protein
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00511
Other glycan degradation
pgj00600
Sphingolipid metabolism
pgj01100
Metabolic pathways
pgj04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
QG516_04100
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
QG516_04100
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
QG516_04100
Enzymes [BR:
pgj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
QG516_04100
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Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR_3
BNR
Tli3
Sortilin-Vps10
CyRPA
Motif
Other DBs
NCBI-ProteinID:
WGQ10835
LinkDB
All DBs
Position
complement(968907..970043)
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AA seq
378 aa
AA seq
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MNRITIILLALLFCLKLSAQQKNTPVFVSGKEGYKSFRIPAIVNLPNGTLLAFCEGRVND
SGDFGDIDIVMKKSTDNGKTWSDLQVVAEFGHLQLCNPAPVVDLTDPRFPKGRIFLFYNT
GTQSEGDVINGKGIKLCMYKTSTDGGQTWSDQVDITSQVHRPKQPLISPAYNFDEDWRYY
ANTPGHGMQFQSGKYKGRIFIAANHTAGDRKAGAGHYVAHGYYSDDHGKTFKLGNSLNLP
GSNESMAAELSDSRLMMNSRNQNGDKRERIVSISSDGGASWDTTYFDPNLIDPVCQGSIL
NIGTKKGKNILAFCNAADTKRRDNLMLRVSFDEGKTWQVNIPVYKGEGKANVSYAAYSDL
VKLSNKKIGVLFEKDDYS
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaattacaattattttattagcattactattttgcttaaagcttagcgcccag
caaaagaatacccctgtatttgtttcaggaaaagaaggatataagagcttccgtatcccc
gcaattgtaaatttaccaaacggcaccttattggccttttgtgaaggcagagtgaacgat
tcaggtgattttggagatattgatattgtcatgaagaaaagcacggataatggcaaaacc
tggtctgacttacaggtagttgcagagtttgggcacctgcaattgtgtaatccagctccg
gtggtggatctgactgatccaaggttccctaaaggtagaattttcctgttttataatact
ggtacacagagtgaaggcgatgtcataaacgggaaaggaattaaactgtgtatgtataaa
acttctacagatggcggtcaaacctggtctgatcaggtggatattaccagtcaggtgcat
cgccctaaacaacctttgataagtccagcatataattttgatgaagattggaggtattat
gcaaatactcctgggcatgggatgcagttccagtctggaaaatacaagggtagaattttt
atagcggcgaaccatactgccggagataggaaagccggagctggtcattatgtagcccat
ggttattatagcgacgaccatggtaaaacattcaaacttggcaatagcttaaatcttcct
ggaagtaatgagtctatggccgctgagctttctgatagcagattgatgatgaatagccgc
aatcagaatggcgacaaaagggaaaggattgtctctattagtagtgacgggggagcaagc
tgggataccacttattttgatcctaatttgatagatccggtttgtcagggtagtatttta
aatataggtactaaaaaaggtaaaaatatactggcattctgtaacgcagcagataccaaa
cgtcgggacaacctcatgcttcgtgttagttttgatgaaggaaaaacctggcaggtaaat
attccagtttataaaggggaaggtaaggctaatgtttcttatgccgcttattctgatttg
gttaagcttagcaacaagaagatcggagttttgtttgaaaaggatgattattcataa
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