Pedobacter gandavensis: QG516_05010
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Entry
QG516_05010 CDS
T09013
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgj03000
]
QG516_05010
Transcription factors [BR:
pgj03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
QG516_05010
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_AsnC-type
NirdL-like_HTH
HTH_Crp_2
HTH_5
HTH_IclR
MarR
Imm65
Fe_dep_repress
MarR_2
HemN_C
LexA_DNA_bind
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WGQ11013
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Position
complement(1187403..1187936)
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AA seq
177 aa
AA seq
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MYITVKTTIFVACWILFQQNAMMEKLDKLDTRILNILQKDASLSTKDIAGEIGLSVSPTH
ERIKRLKLEGYIEKYVALVNREKLGKHLLVLCTVTLKEQSIATLKNFEESVVQFKEVLEV
LCIAGGQDYLLKIVVEDVDDYHTFVVTHLSSLSNISTLSSSFVLKEIKRETAFHLNF
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgtatataacagtaaaaactaccatatttgtggcttgctggatcctatttcagcaaaat
gctatgatggagaaattagataagctcgacaccaggatattaaacatcctgcaaaaggat
gcttctttaagtacaaaagacattgcaggggaaattggcctaagtgtttccccaactcat
gagcgcatcaagcgcctgaaattagaaggatatatagagaaatatgtagcactggtaaac
cgggaaaagctgggaaaacacttactggtgctctgtaccgtaactttaaaagaacaatcc
attgctaccttaaagaacttcgaagaatcagtagtgcaatttaaggaagtgctggaagta
ctgtgtattgccggcggacaagattatctactcaaaatcgtagtagaagatgtagacgat
taccatacttttgtggttactcatttatcttcactttccaatatttctaccttaagcagt
agttttgtgttaaaagagatcaaaagagaaacagcattccaccttaatttctaa
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