Pedobacter gandavensis: QG516_05100
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Entry
QG516_05100 CDS
T09013
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00541
Biosynthesis of various nucleotide sugars
pgj01100
Metabolic pathways
pgj01250
Biosynthesis of nucleotide sugars
Module
pgj_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QG516_05100 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pgj01005
]
QG516_05100 (kdsA)
Enzymes [BR:
pgj01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
QG516_05100 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
pgj01005
]
Lipid A
QG516_05100 (kdsA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
GcpE
NeuB
Motif
Other DBs
NCBI-ProteinID:
WGQ11031
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Position
complement(1203199..1204014)
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AA seq
271 aa
AA seq
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MINFPLDNLKHQESNNFFLMAGPCAIEGEEIAMRIAEKIITITDKLEIPFIFKGSYRKAN
RSKGGSFTGIGDEKALKILEKIGKTFNVPTVTDIHESAEAAMAAAYVDVLQIPAFLCRQT
DLLIAAAKTGKVVNVKKGQFLSAGSMKFAVEKIVESGNHKVILTDRGNTFGYQDLIVDYR
GLPEMQSFGVPVVMDCTHSLQQPNQSSGVTGGKPELIETIAKAAIAVGADGLFIETHPDP
ANAKSDGANMLHLDLLEDLLVKLVRIRKAVI
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgatcaattttccactagataatttaaaacaccaggaatcaaataatttctttttaatg
gcaggaccctgtgccattgaaggagaagaaatcgctatgcgcattgcagagaagatcatc
acaattactgataaattagagattccctttatttttaaaggttcctaccgtaaagccaac
cgttctaaaggcggttctttcaccggaatcggagatgagaaagctttgaagattttagaa
aagataggtaagacttttaatgtgcctaccgtaactgatattcatgaaagtgcagaagcg
gcaatggctgcggcttatgtggatgtattgcagatcccagcttttctgtgtcgtcaaacc
gacctgctcatcgctgctgcgaaaacaggaaaggtagtcaacgtgaagaaaggtcagttt
ttgtctgcaggatctatgaaatttgcagtagaaaagattgtagaatccggaaaccataaa
gtaatcctgacagatcgtggcaacacttttggttatcaggacctgattgtggattatcgt
ggattaccagaaatgcaaagcttcggagtgccggtagtcatggattgtacgcattccctg
cagcagccaaaccaaagttctggggtaaccggtggtaaacctgaactgattgaaacgatc
gctaaagctgcaattgcagtgggcgcagatggattattcattgaaacacatcctgatcct
gcaaatgcaaaatcagatggtgcaaatatgttacacctggatttactggaagatttactg
gtaaaactggtaagaattagaaaagcggttatttaa
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