Pedobacter gandavensis: QG516_05170
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Entry
QG516_05170 CDS
T09013
Name
(GenBank) citrate synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00020
Citrate cycle (TCA cycle)
pgj00630
Glyoxylate and dicarboxylate metabolism
pgj01100
Metabolic pathways
pgj01110
Biosynthesis of secondary metabolites
pgj01120
Microbial metabolism in diverse environments
pgj01200
Carbon metabolism
pgj01210
2-Oxocarboxylic acid metabolism
pgj01230
Biosynthesis of amino acids
Module
pgj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pgj_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
QG516_05170
00630 Glyoxylate and dicarboxylate metabolism
QG516_05170
Enzymes [BR:
pgj01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
QG516_05170
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
Motif
Other DBs
NCBI-ProteinID:
WGQ11045
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All DBs
Position
complement(1218898..1220184)
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AA seq
428 aa
AA seq
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MSDIAEIKIDGKVYEFPVITGTEGEKSIDISKLRDLTGHITLDFGYKNTGSTKSAITFLD
GEKGILKYRGYSIEELAEKSTFLEVAYLLIYGDLPTTEQLTDFQVSISRHTLIHEDMKKF
LDGYPSKSHPMAQLASLVCSLSTFYPESLNANSSPETMDLTMIKLLAKFPTIVSFIYKKS
LGHPLIYPKNKYDYVSNFLNMIFGQRTEEIDIDPVVVSAMNTLLILHADHEQNCSASTVR
MVGSSDCNLYASVSAGIAALWGPLHGGANQAVIEMLERIKEDGGDTEKWINKAKDKNDPF
RMMGFGHRVYKNFDPRAKIIKKACDDILEKLGINDPVLEIAKKLEEAALSDPYFVERKLY
PNVDFYSGIIYRALGFPTDMFTVLFALGRLPGWIAQWKEMHENKEPIGRPRQVYVGHTNR
EFVPLDKR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatattgcagaaattaagattgacggaaaagtctatgaatttcccgttattacc
ggtaccgaaggggagaagtctatagatatttctaaacttagagatttaaccggtcacatt
accttagactttggttacaaaaacaccggatccactaaaagtgcaattacctttttagac
ggagaaaaggggattttaaaataccgtggttattcaattgaagaacttgcggaaaaatct
accttcttagaagtagcatacctgcttatatatggcgatttacctaccactgagcaactg
actgatttccaggtttcgatcagccgtcatacactgattcatgaagatatgaagaagttt
ttagatggttacccttctaaatctcatccgatggcgcagttggcttcattggtgtgctca
ttgtctactttctacccagagtcattgaatgcaaactcttcgccggaaaccatggatctg
accatgattaaattactggctaagttcccaacgattgtatctttcatttataaaaaatct
ttaggtcacccactgatctatccaaaaaataaatacgactacgttagcaatttcttaaac
atgatcttcggtcagcgtacagaagaaattgatattgatcctgtagtcgtaagtgcgatg
aatactttactgatcttacatgcggatcatgagcaaaactgttctgcatcgaccgtaaga
atggtaggctcatcagactgtaacctttacgcttctgtttctgcaggaatcgctgcttta
tggggtccacttcatggtggtgccaaccaggcggtaattgaaatgctggaacgcattaaa
gaagatggtggtgatacagaaaaatggatcaacaaagcaaaagataaaaacgatcctttc
cgtatgatgggcttcggacacagagtttataaaaactttgacccaagagctaaaatcatt
aagaaagcttgtgacgatattttagaaaaattaggtatcaatgatccagtattggagatt
gctaagaaattagaagaagctgcattgagcgatccttactttgtagagcgtaagctttat
cctaacgtagatttctattctggaatcatttacagagcgctaggcttccctacagatatg
ttcacggtattgtttgctttaggacgtctgccaggatggattgcacaatggaaagaaatg
catgagaataaagaaccaatcggtcgcccacgtcaggtgtatgttggtcataccaataga
gaatttgtgcctttagacaagcgttaa
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