Pedobacter gandavensis: QG516_07275
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Entry
QG516_07275 CDS
T09013
Name
(GenBank) ATP-dependent DNA ligase
Organism
pgj
Pedobacter gandavensis
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
WGQ11454
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Position
1759918..1761513
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AA seq
531 aa
AA seq
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MKRFTELIAQLESSNKTNDKMAALVAYFNEAEEQDKPYVIAMFTGKKPKRPVSTALLKEW
AIEKSGIPAWLFAESYHNVGDLSETIALILPPPTQTSDLKLSEWIKALAVLNGLDDSAKK
SFITDSWDRLNTPERFIFNKLISGNFRIGVSGKMLVNALAKQSQVPANQIMHSIMGKWNP
EEITYSELIAGAHVNTDHSWPYPFCLAYALEQAPEALGTVQEWQAEWKWDGIRGQIVKRG
GELFIWSRGEELVTDQFPELHFLSAELPDGTVLDGEILAVKSGKVLPFAILQQRLNRKTI
AKNQLENAPIGFYCYDLIEYQGADQRGEPLKNRRKKLELLISKIPAQENLFLSPVVEAKS
WTALAEIRMDSRAMNSEGLMLKKLDSLYHSGRKRGDWWKWKINPYTVDAVMIYAQKGSGR
RAGFFTDYTFAIRDGDQLITIAKAYSGLTDAEIKEVDAFVKKNAIEKFGPVRTVKPELVF
EIAFEGIAESKRHKAGLALRFPRIARWRKDKKAEEINTLADLRQLLNSTLE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgattcacagaactgatcgcccagctggaaagcagcaataaaaccaacgataag
atggccgcactggtcgcttattttaatgaagcagaagagcaggacaaaccttacgtgatt
gccatgtttacgggaaaaaagccaaagcgaccggtcagcaccgcattgcttaaagaatgg
gctattgaaaaaagcgggattcccgcctggctgtttgccgaaagctaccataatgtagga
gacctgagcgaaacgattgccctgattttaccgcctccaacgcaaaccagcgaccttaaa
ctgagcgaatggattaaggctttggcagtccttaatggtttagatgattcggctaaaaaa
agttttatcactgattcctgggatcgcctcaacactcctgaacgctttatttttaataaa
ctgatctcaggaaacttcagaattggggtttccggaaaaatgctggtcaatgctttagcc
aaacaaagtcaggttcctgccaaccagatcatgcacagcatcatgggcaaatggaatccg
gaagaaattacatattctgagctgattgcaggtgcgcatgtgaatacagaccattcctgg
ccctatccattttgtctggcctatgcgctggagcaagctccggaagcgttgggaaccgta
caagaatggcaggcagaatggaaatgggatggtatccgcggacaaattgtaaagcgtggc
ggagaactttttatctggtctagaggagaagaattggtcacagatcagtttccggagctt
catttcttatctgcggaattaccggatggaaccgttctggatggagaaattcttgcagtc
aaatcgggaaaagtattgccatttgccatattgcagcagcggctaaaccggaaaaccatt
gctaaaaatcagctggaaaatgcacctataggtttttactgttacgacctgatcgaatac
cagggagcagatcagcgtggggaaccactaaaaaatagaaggaaaaaactggaactgctc
atttctaaaattccagcacaggaaaacctcttcctttctccagtggtggaagcgaaatcc
tggacagcacttgcggaaataagaatggattccagggccatgaacagcgagggattgatg
ctcaaaaaactagattctctataccatagcggcagaaaaagaggcgattggtggaaatgg
aaaatcaacccttataccgttgatgcggttatgatttatgcacaaaaaggaagcggcaga
agagccggctttttcacagattatacttttgctatacgcgatggcgatcagctgattacc
attgccaaggcttattccggattaacagatgcagaaattaaagaggttgatgcttttgta
aagaaaaatgcaatagagaaatttggccccgtacgtactgttaaaccagaactggtattt
gaaattgcttttgaaggtattgctgaaagtaaaagacacaaagccggtctcgccctgcgc
ttccccaggattgccaggtggagaaaggataaaaaagcggaagagatcaatactttagcc
gatttaaggcaattgttaaattctacattagaatag
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