KEGG   Pedobacter gandavensis: QG516_07280
Entry
QG516_07280       CDS       T09013                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pgj  Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:pgj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgj03400]
    QG516_07280
Enzymes [BR:pgj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QG516_07280
    5.6.2.6  RNA 3'-5' helicase
     QG516_07280
DNA repair and recombination proteins [BR:pgj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    QG516_07280
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: WGQ11455
LinkDB
Position
1761519..1764050
AA seq 843 aa
MGIEKSSGYRQVLKWLKSGKRKPFQFQSDAWQYYAEGYSGLINAPTGFGKTFSLFLAVVI
EELNEQAENSSKLPRKKGLKKPVKASKGLKLIWITPLRSLAKDLARAMREVCAELELDWQ
ISVRNGDTTASEKLKQKKQMPEVLIITPESMHLLLAQKNNFAHFYPLRCIVADEWHELIG
SKRGVMAELAISRIKGILKEKHPERLLRIWGISATIGNLEQAMEVLVPYPDLLKIIVRAE
VKKKILIKSILPDHIDMLPWAGHLGHKLAHKLLPIIHKSKTTLIFTNTRGQAELWYQNLL
ALDESLAGVLAIHHGSIDYELRNWIEDALHSGILKAVISTSSLDLGVDFKPVDTVVQIGS
PKGVARFLQRAGRSGHSPNETSKIYFLPTHALELVEAAAIKEAAKTQQIESREPIVMAFD
TLIQYLVTLAVGDGFKEDQIYEEVKETHAFQELLPSEWSWMMQFITTGGDSLTAYNEFKK
VVKTEDGLWKVESRQIAMRHRLHIGTIVSDAMIKVKYLGGGYIGMVEESFLSKLKAGNSF
TLAGRILEFVMVKEMTALVRRSKAKKAISPSWMGGRISLSANLGSILRKKYNETLDQTHE
DEELDIVFPLFERQAAVSHVPKNDEFLVELIHTKDGYHIFAYPFEGRMVHEALAALIAYR
LSRHTPISFSIAMNDYGFELLSEHPIPLDEEEIRTLFSPAQLGEDIVSSINATEMARRKF
RDIACISGLVFQGFPGKYTANKHLQSSSALFFNVFTDYDPRNLLLRQAYEEAFYQQIEEP
RLLAALQRIQQSTIILKRPESYTPLCFPIKVDSLRENMSTEELGQRIERMTVEADKKNKK
NKA
NT seq 2532 nt   +upstreamnt  +downstreamnt
atgggtatagaaaagagcagtggctatcgacaggtattaaaatggctgaaatcggggaag
agaaaacctttccagtttcaaagcgatgcctggcaatattacgcggaaggatacagtgga
ttgatcaatgcacccacaggttttggaaaaacattctctctttttcttgccgtggttatt
gaagaattgaatgaacaagctgaaaacagttcgaaattgcctagaaaaaagggattgaag
aaacccgtaaaagcgagcaagggtttaaagttgatctggattacgccactccgttcctta
gcaaaggaccttgcccgcgccatgcgggaagtttgtgcagaactagagttggactggcaa
atttctgttagaaacggagatacgacggcatcagaaaagctgaagcaaaagaaacaaatg
ccagaagtattgatcattacccctgaaagcatgcatttattgctggctcagaagaacaat
tttgcccatttttatccgctgcgatgtattgttgccgatgaatggcatgaattgatcgga
agtaaacggggcgtgatggcagaactggcaatttccagaattaaaggtattttaaaagaa
aaacatccggaacgactgcttagaatatggggcatttcggccacgataggcaacctggag
caggctatggaggtgctagttccctatcctgatttgctaaaaatcattgtcagggctgag
gtaaaaaagaaaatcctgatcaagtctatcctacctgatcatatcgatatgctgccatgg
gcaggacatttgggtcataaactggcgcataaactcttacccattatccataagagcaag
actaccctgattttcaccaataccagagggcaggcagaattatggtatcaaaacctgctg
gccctagatgaaagcctggctggggtcctggcgattcatcatggttctatagattacgaa
ttacgcaactggattgaagatgctttgcattcaggaatattaaaagcagtcatcagtact
tcttcccttgatctgggtgtcgattttaagccggtagacacggtggttcaaattggctcc
cctaaaggagttgcccggtttttacagcgtgccggaagaagtgggcattctccaaatgag
acttcaaagatctatttccttcctacccatgccctggaattggttgaagcagcggccatt
aaagaggctgcaaaaacacagcagatagaaagtcgggaaccgatagtgatggcttttgat
acgctcatccagtacctggttacacttgccgtaggcgatggctttaaggaagatcaaatc
tatgaagaagtaaaagaaacccatgctttccaggaactgctgccttcagaatggagctgg
atgatgcagtttatcaccactggcggcgacagtctgacggcctataatgaatttaaaaaa
gtggttaaaacggaggatgggctatggaaagtggaaagcaggcaaatcgccatgcgccac
cgccttcatattggtacgatcgtcagtgatgccatgatcaaagtaaaatatctcggcggc
ggatatatagggatggtagaggaatctttcctttccaaattaaaagcgggaaatagcttt
acactagcaggaaggatattagaattcgttatggtcaaagaaatgacggccctggtgagg
cgcagcaaagcgaaaaaggcgatcagtccgagctggatgggcggccggatttcattgagt
gccaatctgggcagtattttaaggaaaaaatacaatgagacgctggatcaaacacatgaa
gatgaagagctggacatcgtttttcctctttttgaaagacaggccgccgtatctcatgta
cccaaaaacgatgagtttctggtagaattgattcatacgaaagacggctaccatattttt
gcttacccatttgaaggccgtatggtgcatgaggctttagccgcattaattgcctatcgc
ctgagtcgccataccccgatcagtttttcgatcgccatgaatgactatggatttgaattg
ctgtcagagcatcccattcctttggatgaagaagaaatcaggactttattcagtcctgcg
caactaggagaagacatcgtgagcagtatcaatgccacagaaatggccagaagaaagttt
agggatatcgcctgtatctccggattggttttccagggattccctggtaaatataccgcc
aacaaacatttacaatcgtcgtcggctttatttttcaatgtttttacggattatgatccg
aggaacttattattgcgtcaggcttatgaagaggcattttaccagcaaattgaagagccc
agattattggcagccttgcagcgcatccagcaaagcacgatcatattaaagcgaccagag
agttatacaccgctctgtttcccgatcaaagtggatagtctaagagaaaacatgagcaca
gaagagctaggacaaaggattgaaagaatgaccgttgaggcggacaaaaagaacaaaaaa
aataaagcttaa

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