Pedobacter gandavensis: QG516_07580
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Entry
QG516_07580 CDS
T09013
Name
(GenBank) alpha-L-fucosidase
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00511
Other glycan degradation
pgj04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
QG516_07580
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
QG516_07580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgj04147
]
QG516_07580
Enzymes [BR:
pgj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
QG516_07580
Exosome [BR:
pgj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
QG516_07580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
GHL6
Fucosidase_C
ARM_KDM8_N
Motif
Other DBs
NCBI-ProteinID:
WGQ11514
LinkDB
All DBs
Position
complement(1836915..1838795)
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AA seq
626 aa
AA seq
DB search
MRMNCKSAVLLLSLSLSAGYSYSQVAGDEDKDMFNQAKARDERAIEAAKNGWWTASMKNH
EERIQWWRDAKFGMFIHWGLYSIPEGEWKGKVVDGYAEHLMRKEKISRAAYLDLAHQFNP
MKFNAEEWILEAKKAGMNYFIVTAKHHDGFAMFDSKVSDFDVMDQTPFKRDPMAELAAAA
KKHGMKFGFYYSHAFDWEDPNAPGNDWEYKNPGGDQLIGGANWFDNHPEWLPKAQQYVNE
KAIPQIKELINTYHPDILWFDTPHKLPFSENLRILQAIRETDPNIVVNGRLARSATGNFG
DYLNTGDRPAEFRTVAGDWEAIPTTNESYGYSKHDNSHKPAGFFIRLLANASARGGNLLM
NIGPKGDGSFDQKDQRILDSIGPWLHKNSASIFGTQRSGLPIPAWGVTTQKGMQVYLHIF
EWPKDGKLLLAGLKTDVKQAYLLNDPAKKKLEIKRLSPADLSISVPKQSPDLVDAVVVLE
LSAPLAVDSWRLLANKDVTNRLLSFDATLHGKGFGFGDGKTNRYFVDGLKEKGQYFSWDV
KTLAPAKYKVLVKYIGGADPKGTYRFQLGPMNKEMPAIVQKSGVVTQEIGSVSLNKGQYQ
LKLSAENTNGVELMKLLEVQLIPIAL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgaattgtaagtcggctgttttattactgtccttatcgttgagcgcgggttat
agctatagccaggtggcgggtgatgaagataaggatatgtttaaccaggcaaaagcgcgt
gatgagcgggcaatagaagctgctaaaaatggctggtggacggcttcaatgaaaaatcat
gaagagcggattcaatggtggagggatgcgaagtttggtatgttcatccattgggggctt
tattctatccctgagggagaatggaaagggaaagttgtagacggttatgcagaacatttg
atgcgtaaagaaaaaatcagcagggctgcttatctggatcttgctcatcaattcaatcct
atgaaatttaacgcagaggaatggattttggaggcaaaaaaagcgggcatgaattatttc
atcgtgactgcgaaacaccatgatggctttgcgatgtttgattctaaagtttcggatttt
gatgtgatggatcagacaccttttaagcgggatccgatggcagaattggctgcagcagcc
aagaaacatggaatgaagtttgggttttactactctcatgcttttgattgggaagatcct
aatgcgccgggcaatgactgggagtataaaaatccaggaggtgatcagttgattggtggt
gcaaactggttcgataaccatccggaatggttgcctaaagcacagcaatatgtaaatgag
aaggcaattcctcagattaaagaattgatcaatacctatcatccagatattttatggttt
gatacgccacataaattacccttttccgaaaatctgcggatactacaggccattcgggaa
actgaccctaatattgtggtcaatggccgtttggcgagaagcgctactgggaattttggt
gattatctaaatacaggagaccgtccggcagaatttcgtactgtagccggagattgggag
gcgattcctactacaaatgaatcttacggttattcaaaacatgataacagtcataagcct
gctggtttttttattcgcctgctggctaatgcaagcgctcgtggtggtaatctattgatg
aatattggccctaaaggagatggaagtttcgaccagaaagaccagcgtattttagatagt
atcggcccctggctgcataaaaactcggcttcgatttttggtacccaacgctctggcttg
ccaatcccggcatggggagtaaccacacaaaaaggcatgcaggtttatctgcacattttt
gaatggccaaaggatggcaagttattgctggcaggattaaaaacggatgttaaacaggct
tatctattgaatgatccggcaaaaaagaaattagaaataaagcgtttaagcccggcagat
ttaagtatttctgttcctaaacaaagtccggatctggtggatgcagtggtggtattggaa
ctaagtgcccctttagcagtagattcttggcgactgctggccaataaagatgtaacgaat
aggctgctttcttttgatgcgacgttgcatggcaaaggttttggctttggggatggaaaa
accaaccgttatttcgtggatggcttaaaagagaaaggacagtacttctcctgggatgtt
aaaaccctggctcctgcaaagtataaggtattggtgaaatacattggcggagcggatccg
aaagggacttatcgctttcagcttggacctatgaataaagaaatgcccgctatcgttcag
aaatcaggtgttgtgacccaggaaataggatcggtttcgctgaataaaggccagtaccag
ttaaaacttagtgcagaaaacacgaatggtgtcgaactgatgaaactcctggaagtccag
ttaataccgatagcgctttga
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