Pedobacter gandavensis: QG516_08515
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Entry
QG516_08515 CDS
T09013
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K11921
LysR family transcriptional regulator, cyn operon transcriptional activator
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgj03000
]
QG516_08515
Transcription factors [BR:
pgj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
QG516_08515
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
MarR_2
DUF832
HTH_30
Motif
Other DBs
NCBI-ProteinID:
WGQ11692
LinkDB
All DBs
Position
2073220..2074092
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AA seq
290 aa
AA seq
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MEFRQLNYFIKAAELLHFTAAAEQCFVTQSTLSQQVKQLEEELGMLLFDRVGKNVQLTEA
GKLFLNHARQIMLEIKKSKQAIFELNNLVNGELRIGVTYAFISLLLPSLTPFSNKYPGIK
LHIESGIAGELEARLKTADLDFILAFHEQSDNEGLEMQSLFSSRIKMVTSKKHPLAKLSK
ISLKELAQTEMILANKGFSSRDMLDEIFKKNNIIPNIKIEMNDTHSLLSLVDTGNWVTII
NEKTITGWEDLVAIPITGKELYKEAYILWQKGVFRKKSATLFIEELLKIV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaattcagacagctcaattatttcatcaaggcggcagaactgctgcatttcaccgca
gctgcggagcaatgttttgtgacccaatccaccttatcacagcaagtaaaacagctggaa
gaagaactgggaatgctgctattcgaccgggtgggcaagaatgtacagctgacagaggct
ggcaagctatttctaaaccatgccaggcaaattatgctggagatcaagaaatccaagcaa
gccatatttgaactgaacaacctagtaaatggagagttgagaattggcgttacgtatgcc
ttcatttctttacttctaccctctctcaccccgttctccaataaatatcctggcattaaa
ctacatatagaatctggcattgccggcgaattggaagcccggctaaaaacggcagatctt
gattttatcctggcctttcatgagcaatccgataatgaaggattagagatgcaatcgctg
ttttcttccaggataaagatggtgacctccaaaaagcatcccctagcgaaattaagcaag
atctctttaaaagaactggcacaaacggaaatgatcttagcaaacaaaggattcagctct
cgggatatgctggacgaaattttcaagaaaaacaatattattccgaacattaaaatagag
atgaatgatacacattccctcctttctttagtggataccggaaattgggtcaccattatc
aatgagaaaaccattactggctgggaagatctggttgccataccgattaccggaaaagag
ctgtataaagaagcttatatcttatggcagaaaggcgtttttagaaaaaaatcagcaact
ctttttatagaagagctgctgaagatagtataa
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