Pedobacter gandavensis: QG516_08825
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Entry
QG516_08825 CDS
T09013
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00450
Selenocompound metabolism
pgj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
QG516_08825
Enzymes [BR:
pgj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
QG516_08825
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
QG516_08825
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
ComA
Motif
Other DBs
NCBI-ProteinID:
WGQ11747
LinkDB
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Position
2141984..2143291
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AA seq
435 aa
AA seq
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MKTPASKSSLSIDKHIESGEQASPADHKKVSFDIQAIRTQFPILSRKVNEKNLIYFDNAA
TSQKPQAVIDALSDYYSRYNANIHRGIHTLAEEATLAYEASRYAVQEFIGAAMVEEIVFT
RGTTEAINLVAYTWGRQNIKTGDEILISGMEHHSNIVPWQMLCQEKNAVLKVIPVLDDGT
LSMDQYQQLLNEKTKIVAIVQVSNALGTVNPVKEMIAMAHQFGAKVLVDGAQSAVHLDID
VLDLDCDFFAFSGHKLYAPTGIGVLYGKQELLEEMPVFQGGGEMIKEVSFELTTYNDLPY
KYEAGTPNIADTIALKTAFDFIKSIGKDQIRKHEHELLNYATAQLENIPGLEIIGKAKEK
VSLVSFIIKNTHPQDIGILLDNLGIAVRTGHHCTQPLMKRFGIPGTVRASFAVYNTKEEI
DGLIAGIYKAIKMLS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactccagcctccaaatcttctttatcaatagacaaacacattgaatcaggcgaa
caagccagtcctgccgatcacaaaaaggtctcttttgatatacaagccatcagaacacaa
ttccccattctaagtagaaaggtgaatgagaaaaatctgatttattttgataacgcggca
acgtctcaaaaaccacaggctgtcatagatgcgctaagcgattattacagccgctataac
gccaatatccaccgcggaatacatacgctggcagaagaagctacattagcttatgaagct
agtcgatatgcagttcaggagttcattggcgcagcaatggtagaagaaatagtttttacc
agggggaccactgaagcgatcaacctggtggcctatacctggggcaggcaaaatatcaaa
accggagatgaaattttaatctcaggaatggaacatcactctaatattgtaccctggcag
atgctttgtcaggagaagaatgcggttttaaaggtgattcctgtattggatgatggaact
ctttctatggatcaatatcagcagttactgaatgaaaaaacaaaaatcgttgccattgta
caagtatcgaatgctctgggaactgttaatcctgtgaaagaaatgattgcaatggcgcat
caatttggcgcaaaagtattggtagatggtgcccaatccgcagtacatctggacattgat
gtgctagatctggactgtgattttttcgccttttcaggacataaattatacgctcctact
ggcataggagtcctttatggaaaacaggagcttttggaagagatgcctgtttttcaaggt
ggtggagaaatgattaaagaggtgagttttgaactgactacctacaatgaccttccctat
aaatatgaagccggaacaccaaatattgccgataccattgctttaaaaacggctttcgac
tttatcaaaagcataggaaaagatcaaatcagaaaacatgagcatgaattacttaattat
gcaacggctcagttagaaaacatacctggtttagagatcatcggaaaagcaaaagaaaaa
gtaagtctggtttcattcatcatcaaaaacacccaccctcaagacattggcatcctactg
gacaacttgggaatagccgtcagaaccgggcaccattgcactcagccattgatgaagcga
ttcggtattcccggaacagtaagagcttcttttgcagtttacaatacgaaagaagaaata
gatgggctgattgcaggaatttataaagctattaaaatgttatcctaa
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