KEGG   Pedobacter gandavensis: QG516_08950
Entry
QG516_08950       CDS       T09013                                 
Name
(GenBank) helix-hairpin-helix domain-containing protein
  KO
K02347  DNA polymerase (family X)
Organism
pgj  Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:pgj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgj03400]
    QG516_08950
DNA repair and recombination proteins [BR:pgj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerase
    QG516_08950
SSDB
Motif
Pfam: HHH_8 HHH_5 DNA_pol_B_thumb RNA_pol_A_CTD HRDC
Other DBs
NCBI-ProteinID: WGQ11770
LinkDB
Position
2166096..2167772
AA seq 558 aa
MENKTISRNLRLLSQLMELHNENPFKIKSVANAGLKVDKLPFAIQGKSLEEIAQIDGLGK
SISAKVWELLETGTMSDLQEILERTPEGIVEMLGIKGIGPKKILVIWKDLGIENIGELYY
ACNENRLIEAKGFGLKTQEEIKKIIEFRMAGLGKFLYAHAESTVNKLYADLAVWLNQISG
APLLGIAGEYRRCMEIIENVPFLIGATSPEEVQEKISSFDGLTFEEQADGTFHATTLSGL
KTQIHLCPKETFYLNWFKLTGNEQHVNEVLALAGNGPFETEEDIYKAAGLAFVAPEIREG
LNEVQLAKENKLPTLISYEDLKGSLHNHSTWSDGVHTLEQMATFCKDNLKMEYFGICDHS
KSAFYANGLNEQRLYAQHQEIDALNAKLAPFKIFKGIESDILNDGSLDYSDDILKTFDFV
VASVHSNLRMDEDKATARLIKAIENPYTTILGHPTGRLLLSRKGYPIDYAKVIDACAANK
VVIEINANPLRLDLDWRWHRYALEKGVLLSVNPDAHRMEGFYDMHYGVLIGRKGGLEAKQ
CLNAMTLQDISEYFHNKK
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggaaaataagaccatttcacgcaatttgcgactgctttctcaattgatggaattacac
aatgagaacccttttaagatcaaatcagtagctaatgctggtttaaaagtagataaactt
ccttttgccattcaaggtaaaagtctggaggaaatcgcacagatcgacggacttggaaag
agcatttctgccaaagtctgggaactcctggaaacaggcacgatgagtgatcttcaagaa
attctggaaagaacaccagaaggtattgtcgaaatgctgggcatcaaaggtattggacct
aaaaaaatcctcgtgatctggaaagaccttggtattgaaaacatcggagaactttattat
gcctgtaatgaaaaccgcctgatcgaagctaaaggctttggattgaaaacccaggaagag
atcaaaaagatcatcgagtttaggatggctggattagggaaattcttatacgcccatgca
gaaagtaccgtaaataagctatatgcagaccttgcggtgtggttaaaccagatttctgga
gcgccgttattaggtattgccggcgaatacagacgctgcatggagatcattgaaaatgtt
cctttcttaataggtgccactagccctgaagaagttcaggagaaaatcagctcatttgac
ggccttacttttgaagagcaggcggatggaacttttcatgccactaccctctccggatta
aaaacacaaatacacctctgtccgaaagaaactttctatctgaattggttcaagctcacc
ggcaatgaacagcatgtgaatgaagtgcttgctctggcaggaaatggtccttttgaaact
gaagaagacatttataaagccgctgggctcgcatttgtagctcctgaaatccgcgaagga
ttaaatgaagtacagctggcaaaagaaaacaaactgccaacactaatcagctacgaagac
ctgaaaggaagtttacacaaccactccacctggagcgatggagtacataccctggagcaa
atggctactttctgcaaagacaacctgaaaatggaatacttcggaatctgcgaccactcc
aaatcagcattctatgccaatggattaaacgaacagcgcttatatgcacaacaccaggaa
atcgatgccttaaacgctaaacttgcccctttcaaaatctttaaaggaattgaaagtgac
atcttgaacgatggatctttagactatagtgatgatattttgaaaacattcgactttgtc
gtagcctctgtgcacagcaatttaagaatggatgaagataaagccaccgcccgattaatt
aaagccatagagaacccttatacaacgattcttggacaccctaccggtagattactgctg
agcagaaaaggatacccgattgattatgcaaaagtaatcgacgcctgcgcagccaataaa
gtggtcatcgaaatcaatgccaatcctttacgtttagacctcgactggcgctggcaccgt
tacgccttagaaaaaggtgttttattatccgttaacccagatgcacatcgaatggaaggc
ttctatgacatgcactatggcgtactcatcggtagaaaaggtggtcttgaagcaaaacag
tgtttaaacgccatgacgctccaagatatctcagaatacttccacaataaaaaatag

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