Pedobacter gandavensis: QG516_09695
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Entry
QG516_09695 CDS
T09013
Name
(GenBank) HAD-IIIA family hydrolase
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00541
Biosynthesis of various nucleotide sugars
pgj01100
Metabolic pathways
pgj01250
Biosynthesis of nucleotide sugars
Module
pgj_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QG516_09695
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pgj01005
]
QG516_09695
Enzymes [BR:
pgj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
QG516_09695
Lipopolysaccharide biosynthesis proteins [BR:
pgj01005
]
Lipid A
QG516_09695
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Gene cluster
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Motif
Pfam:
Hydrolase_3
Hydrolase
Hydrolase_6
HAD_2
Motif
Other DBs
NCBI-ProteinID:
WGQ11911
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Position
complement(2337291..2337818)
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AA seq
175 aa
AA seq
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MFLQKLKEITTFIFDVDGVLTNGDILASDSGEFLRTFNIKDGYALQLAVKKGYHVCIISG
GKGLAMQKRFEGLGITAIFLGVSDKVQVLHNYLEKRQLRLDEVTYMGDDIPDLKVMKLVG
LPTCPADAVSEIKAISQYISPYTGGKTAVRDLIEKVMRVQGKWFDENPAAADSSK
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgcaaaaacttaaagagattaccaccttcatcttcgatgtggatggtgtattg
acaaacggagatattctggcctcagattcgggggagtttttgcggacatttaatattaaa
gatggttatgccctgcagcttgctgtaaaaaagggctaccatgtttgtatcatttctgga
ggtaaaggactggccatgcagaaacgctttgaaggattaggcatcactgctatttttctg
ggtgtatcagataaggtgcaagtacttcataattacctggagaaacgtcagctcagattg
gatgaggtgacttatatgggagatgacatcccagatttgaaggtcatgaaactggtaggt
ctccctacttgcccggcagatgccgtttctgaaattaaagccatttctcaatacatttct
ccttataccggtggtaaaaccgcagtgagggacttgattgaaaaagtaatgcgcgtacag
gggaaatggtttgatgaaaaccctgcagccgctgattccagcaaataa
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