Pedobacter gandavensis: QG516_10345
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Entry
QG516_10345 CDS
T09013
Name
(GenBank) TCR/Tet family MFS transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgj02000
]
QG516_10345
01504 Antimicrobial resistance genes [BR:
pgj01504
]
QG516_10345
Transporters [BR:
pgj02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
QG516_10345
Antimicrobial resistance genes [BR:
pgj01504
]
Gene variants
Tetracycline resistance genes
Transporters
QG516_10345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_4
Motif
Other DBs
NCBI-ProteinID:
WGQ12038
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Position
2486647..2487873
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AA seq
408 aa
AA seq
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MASSRKAALSFIFITMLLDVIGIGLIIPVFPQLIEQLIHGNISEASQWSGLLMFAYAIMQ
FICAPIIGNLSDKYGRRPVLLFSLFGFGIDYIFLALAPSIWWLFLGRIIAGMFGASMTTA
TAYIADISTPENRAQNFGLIGAAFGLGFVVGPALGGLLGELGPRVPFIAAAVLTFVNVIY
GYFVLPESLDKAHRRPFEWSRANPVGSLLCLKKYKGVGGLIVALIFIYIAGQALQSTWTF
INIERFQWNTFLIGISLATAGILVALVQGGLIRYTSPRLGNEKSIYIGLAFSVLGMLLFA
FANQSWMMFAFLVPYCLGGIAGPALQATISQNVPQNEQGELQGALTSLMSATSIVGPLLM
TNLFAWFTNPKAPFKFSGAPFLAAAIFMLISLWICRNTMKKESFINRK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatccagaaaagcggcgttaagcttcattttcattaccatgttattggacgtg
attggcattgggctgatcattccggtattccctcaattgatagaacagttgatccatggc
aatatcagtgaagcttcacaatggagcggcttactcatgtttgcttatgccattatgcaa
ttcatctgtgccccgattatcggtaacctgagtgataaatatggcagaagaccagtatta
cttttctctttatttggctttggcatcgattatattttcctggctttagccccaagtatc
tggtggttattccttggccgcatcattgcgggcatgtttggtgccagtatgaccactgct
acagcctatattgccgacatcagtacgccggaaaacagggcgcaaaacttcggcttaatt
ggcgccgcattcggtttaggctttgtagttggtcctgcgctaggtggcctgcttggtgag
cttggcccaagagtccctttcattgcggcagctgtccttacgtttgtcaatgtgatttac
ggctattttgtattgcctgagtcattggataaggctcaccgacgtccttttgaatggtcc
agagccaatccggtaggttccttactatgcctcaaaaagtacaaaggtgtgggtggttta
atcgtggctttaatttttatttatattgctggtcaggcgctgcaaagtacctggacattc
atcaatatcgaacgtttccaatggaatactttcctcatcggcatctcactggccactgcg
ggaatattagttgcgctggttcagggtggcttaatcaggtacacaagtccgcggttaggt
aatgaaaagagcatatatatcggccttgcgttttctgtcctgggtatgctgttatttgcc
tttgcgaaccaaagctggatgatgtttgcctttctcgtgccctactgtctgggtggaatt
gccggccctgccttacaagccacaatctctcaaaacgttccacagaacgaacaaggagaa
ctacaaggtgctttaaccagtctgatgagtgccacttctattgtaggtcccctactcatg
accaatttattcgcctggtttaccaatccaaaagcaccatttaaattttccggtgctccc
ttccttgctgctgcaatatttatgctgatcagcttatggatttgcaggaacaccatgaaa
aaagaatcttttatcaatagaaaatag
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