KEGG   Pedobacter gandavensis: QG516_10745
Entry
QG516_10745       CDS       T09013                                 
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
pgj  Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:pgj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgj03032]
    QG516_10745
   03036 Chromosome and associated proteins [BR:pgj03036]
    QG516_10745
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pgj02048]
    QG516_10745
Enzymes [BR:pgj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     QG516_10745
DNA replication proteins [BR:pgj03032]
 Prokaryotic type
  DNA Topoisomerases
   QG516_10745
Chromosome and associated proteins [BR:pgj03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    QG516_10745
Prokaryotic defense system [BR:pgj02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    QG516_10745
SSDB
Motif
Pfam: DNA_gyraseB Toprim HATPase_c HATPase_c_3 DNA_gyraseB_C
Other DBs
NCBI-ProteinID: WGQ12115
LinkDB
Position
complement(2578257..2580194)
AA seq 645 aa
MAEPNYNEDSIRSLDWKEHIRLRPGMYIGKLGDGSAQDDGIYVLLKEIVDNSIDEFVMGA
GRTIEITVSDQKVNVRDYGRGIPLGKVIDCVSKINTGGKYDSNAFQKSVGLNGVGTKAVN
ALSNTFVVQSYRDNKTKKVEFSRGEITIDNPIIDTTQRNGTAITFYPDETIFRNYHYITD
FVESMIWNYVFLNAGLTINFNGQKYLSERGLYDLLHKHAGAETIRYPIIHLKGNDIEIAM
THGQQYGEDYHSFVNGQHTTQGGTHQAAFREAVVKTVREFYKKEYDAADIRASIIAAISV
RVQEPVFESQTKTKLGSQNMGPDGPSVRTFINDFVKKELDDYLHKHTDVADALLKRILQS
ERERKDIAGIKKLANDRAKKASLHNKKLRDCKVHFNSTHEKKYETTLFITEGDSASGSIT
KSRDVDCQAVFSLKGKPLNCYELTKKVVYENEEFNLLQHALNIEDGLDGLHYNNIVIATD
ADVDGMHIRLLMMTFFLQFFPDLVRSGHVYILQTPLFRVRNKKETIYCYSDDERKAAITK
LGNKPEITRFKGLGEISPDEFGLFIGKDIRLDPVILKDQTIKSLLEYYMGKNTPDRQRHI
IKNLRIEKDTLEDIVAPADRSKAAAALKQEADDETTDEEMIAESA
NT seq 1938 nt   +upstreamnt  +downstreamnt
atggctgaaccgaattataacgaagatagtatacgctccctcgattggaaggaacacatc
agactgcgtcccggtatgtatatcggtaaacttggagatggttctgctcaggatgacggg
atttatgtattgctgaaggagatcgtcgacaactcaattgatgagtttgtgatgggtgcc
ggacgaaccatagaaattaccgtttctgatcagaaggtaaacgtccgcgattatggtagg
ggaatcccattgggtaaagtaattgattgtgtatcaaaaatcaataccggtggtaagtac
gatagcaatgcctttcagaaatctgtagggctgaatggggtgggtaccaaggccgtaaat
gccttgtctaacactttcgtggtgcaatcgtaccgtgataataaaactaaaaaggtagag
ttctccagaggagagatcacgattgataatccgatcattgataccacacagcgcaatggt
accgcgattacgttttatccggacgaaacgattttcagaaattaccattacatcactgat
ttcgtggaaagtatgatctggaactatgtgttcctgaatgccggactaaccatcaacttc
aacggacaaaaatatttatctgaacgtggactttacgacttactgcacaaacacgcaggg
gcggaaacgattcgctatccgatcattcacctgaaagggaatgatattgagatcgccatg
acccacggacagcaatatggagaagattaccattcttttgtaaacggccagcatactacc
cagggaggaacgcatcaggcggcattccgtgaagcagtagtgaaaaccgtaagagagttt
tataaaaaagaatacgatgctgcagatatcagggcttccattattgccgcgatttcggtc
agggtacaggagccggtatttgaatctcagacgaaaacaaaactgggttcccagaatatg
gggccagacggaccttcagtaaggacttttatcaatgatttcgtaaagaaagaattagac
gattacctgcacaaacataccgatgtagcagatgctttattgaaaaggatcttacagtcg
gaaagagaacgtaaagacattgcgggtattaaaaaactggccaacgacagggctaaaaaa
gcatccctgcacaataaaaaactgagagattgtaaggtgcattttaacagcacacatgag
aagaaatacgaaacgaccctgttcattacagagggagattcggcttctggatcgatcacc
aagtcgagagatgtggattgccaggcagtattcagtctaaaaggaaagcctttaaactgt
tatgagctgactaagaaagtagtctatgagaacgaagagttcaacctgctgcagcatgct
ttaaatattgaagatggcctggatggtttacattacaacaatattgtcatcgctaccgat
gccgacgtagatggaatgcacatcaggttactgatgatgactttctttttgcagttcttc
ccggatttagtgcgctcaggacacgtatacatcctgcaaacgcctttgttccgcgtccgt
aataagaaggaaacgatttattgctatagcgatgacgagcgtaaagcggccattaccaag
ctgggaaataaaccggaaattacccgatttaaaggactgggtgagatctcaccagatgag
tttggtttgtttatcggaaaagacatccgattagatccggtgatcctgaaagaccaaacg
atcaaaagtctactggaatattatatgggcaaaaataccccagacagacagcgtcatatc
atcaaaaacctgagaatagaaaaagatactttagaagatatcgtagctccggcagatcgt
tctaaagcagctgctgcgctaaagcaggaagctgatgatgaaacaacagatgaagaaatg
atcgcagaatctgcttaa

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