Pedobacter gandavensis: QG516_11770
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Entry
QG516_11770 CDS
T09013
Name
(GenBank) glycosyltransferase N-terminal domain-containing protein
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00540
Lipopolysaccharide biosynthesis
pgj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
QG516_11770
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pgj01005
]
QG516_11770
Enzymes [BR:
pgj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
QG516_11770
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
QG516_11770
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
QG516_11770
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
QG516_11770
Lipopolysaccharide biosynthesis proteins [BR:
pgj01005
]
Lipid A
QG516_11770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
USP7_ICP0_bdg
Motif
Other DBs
NCBI-ProteinID:
WGQ12303
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Position
2813230..2814447
Genome browser
AA seq
405 aa
AA seq
DB search
MLWLYNIGISFYGLVLRVFSLFNTKAKLFIEGRTQLFEHIEKTLDASKANIWFHFASLGE
FEQGRPVLEKIKTLHPNKNIVVTFFSPSGYEVRKNYALAAGVFYLPLDTAKNAKRFVAAI
KPEIAIFTKYEYWYHYFKVLHQQNIPLYVISGIFRPDQIFFKWYGAFNREILSFVTHFFV
QNQESVDLLKTIHLENVSLSGDTRFDRVAENAQSPKTIQEVADFCGSNPVFIAGSSWPAD
EQLIAGLIDQHQDWKFIIAPHETDDSHIEALKKLIPAAITHSGLLKGKKKTTQTLIIDNI
GMLSSLYQYGNIAYIGGGFGAGIHNTLEAAAYGIPVIFGPKYAKFQEAKDLIEIGAAISI
ETESDLSAAFLQFQKNAVAGKIAQKYVQDKTGSTRQILDYIARNF
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgctttggctttataatataggaatctctttttatggattagtgctgcgcgtattttcc
ttattcaatacaaaagccaaactgtttatcgaaggtagaactcaactttttgagcatata
gaaaaaacattggatgcttcgaaagccaatatatggtttcattttgcctcactgggcgaa
ttcgagcagggaagacctgttttggaaaaaataaaaacacttcatcccaataaaaatatc
gtggttaccttcttctctccttcggggtatgaggtcagaaaaaactatgctttggcagct
ggtgttttttatctgcctttagatactgctaaaaatgccaaaaggtttgttgcagcgatc
aaacccgaaattgccatcttcaccaagtatgaatattggtaccattatttcaaagtctta
catcagcaaaacatccctttatatgtaatttccgggattttccggccagatcagatattt
ttcaaatggtacggtgcctttaaccgcgaaatcctaagtttcgtcacccatttctttgtt
caaaaccaggagagcgttgacttattaaaaaccattcatttggaaaatgtaagtctaagt
ggagatacgcgtttcgatcgtgtagccgagaatgcacaatcgccaaagaccattcaagaa
gtagcggatttctgcggatcaaatccggtatttattgcgggcagtagctggccagccgat
gaacagttgattgccggacttattgaccagcatcaagactggaaattcatcattgcaccg
catgaaacggatgattcacatattgaagcgctaaaaaaacttattcccgcagcaattact
cattccggattattaaaaggaaagaagaaaactactcaaaccctcatcatagacaacatc
ggcatgctctcctcactttaccaatacggcaatattgcctatatcggaggaggattcggg
gcgggtatccacaataccctggaagctgctgcttatggaatccccgtgatttttggtcct
aagtatgctaaatttcaagaggcaaaagacttgattgaaattggagcagccattagtatt
gaaacagaaagcgatctttctgccgcttttctacaattccaaaagaatgcagttgcggga
aagatcgctcagaaatatgtacaggataaaaccggttctacccgccagatcctggattat
attgctcgtaatttctaa
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