Pedobacter gandavensis: QG516_12080
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Entry
QG516_12080 CDS
T09013
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00260
Glycine, serine and threonine metabolism
pgj00630
Glyoxylate and dicarboxylate metabolism
pgj00670
One carbon pool by folate
pgj00785
Lipoic acid metabolism
pgj01100
Metabolic pathways
pgj01110
Biosynthesis of secondary metabolites
pgj01200
Carbon metabolism
Module
pgj_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QG516_12080 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QG516_12080 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
QG516_12080 (gcvP)
00670 One carbon pool by folate
QG516_12080 (gcvP)
Enzymes [BR:
pgj01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
QG516_12080 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WGQ12363
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Position
2881119..2883998
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AA seq
959 aa
AA seq
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MSLNIHYKEDFKDRHIAPNTEDTNAMLDTLGLGSVDELIEQTVPQSIRLKQPLNLPKAKS
EKDYLSSLKKTASLNKVFKSYIGQGYYDTTTPGVILRNVMENPGWYTQYTPYQAEIAQGR
LQALLNFQTLVIDLTGMEIANASLLDEGTAAAEAMFMQFSLRKNSNAKKFFVSELIFPQT
IDILKTRANPFGIELVIGDHQTVELNEEFFGAIIQYPAGNGEVFDYTGFANTAHGVNVKV
TVIADLLSLTLLTPPGEWGADVVVGTTQRFGVPMGFGGPHAAYFATKDEYKRSIPGRIIG
VTIDSNNNYALRMALQTREQHIRRDKATSNICTAQALLAIMASFYAVYHGPKGLKLIAER
THGLTVTLAESLEKAGYTQLNKSYFDTIQLDLGNLVDSIHRECVDNEINLNYNGSVVTIS
LDETTDLEDVKLLVKIFAKVKGIAADSVEMSEENPATVIPAALQRTSAYLTHPLFNSHHS
EHEMLRYIKSLEAKDLSLCHSMIALGSCTMKLNATTEMIPVTWPEFGRIHPFAPADQVAG
YYTVFNELDKWLSEITGFAAMSLQPNSGAQGEYAGLMVIRAYHQDRGDHHRNVALIPSSA
HGTNPASAAMAGMKIIIVKSLENGNIDVADLKIKAEEHKENLSCLMVTYPSTHGVFEESI
IDICNIIHENGGQVYMDGANMNAQVGLTSPGNIGADVCHLNLHKTFCIPHGGGGPGMGPI
GVAKHLVPYLPAHAVVDINKEKSIPAVSSAPWGSASILVISHAYIAMMGGEGLMNATKNA
ILNANYMKARLEQHYPVLYSGANGRCAHEMILDCRGFKNYGIEVVDIAKRLMDYGFHAPT
VSFPVAGTLMVEPTESEPKHELDRFCDALIAIRKEVTAVENGELDKTDNPLKNAPHTANI
VTADEWNHGYSRQTAAFPLPYVAAFKFWPSVGRVNDSFGDRSLVCACPPIESYMEEQSV
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaaatattcattacaaagaagactttaaagatcgtcacattgctcctaacaca
gaggataccaatgccatgttagacacccttggtttgggttctgttgacgaattaatagaa
caaacggttcctcaatcgatccggttaaaacagccattaaacctgccaaaggcgaaatct
gaaaaggattacctaagcagcttaaagaaaactgcttccttaaacaaagtatttaaatct
tatatcggtcagggatattatgacaccactaccccaggagtaatcttgcgtaacgtgatg
gaaaatccaggatggtatactcaatatacgccttaccaggcagagatcgcacaaggtcgc
ttacaggccctgttaaatttccagactttagtaatcgaccttacaggtatggaaatcgca
aatgcttctctattggatgaaggtactgctgctgctgaagcgatgttcatgcaattcagc
ttgcgcaaaaactcaaatgcgaagaaattcttcgtttcagaattgatcttcccacaaaca
attgacattttaaaaacccgtgccaatccttttggaattgaattagtgatcggtgatcac
caaacggttgaactgaatgaagaattcttcggtgcaatcattcaatacccagctggtaat
ggtgaggttttcgactataccggtttcgcgaatactgctcatggtgtaaatgtaaaagtg
accgtaattgcagatcttttaagcttaaccttattgacgcctccaggtgaatggggtgct
gatgtagtggtaggtaccacacagcgctttggtgtgccaatgggcttcggtggtcctcat
gctgcttatttcgctactaaagatgaatacaaacgctctattccaggtcgtatcatcggg
gtaacgatcgacagcaataataactacgccttacgtatggctttgcaaaccagggaacag
cacatccgtagagataaagcgacttccaacatctgtactgcacaagcgttattagcgatt
atggctagtttctacgcagtttatcacggtccgaaaggattgaaactgatcgcagaacgt
acgcatggattgacggtaactttagctgaatcattagagaaagcaggttatacacaattg
aataaatcttactttgacaccattcagttagacttaggcaaccttgttgattctatccat
agagaatgtgtagacaatgagatcaacttaaactacaatggcagcgtagtgaccatctct
ttagatgagactacagacctggaagatgtgaagttattggtgaaaatctttgcgaaagta
aaaggtatcgctgcggatagcgttgaaatgtctgaagaaaatcctgcaacagtgattcca
gctgctttgcaacgtacttctgcttacttaacacacccactattcaactcgcaccattca
gagcatgaaatgctgcgttatattaaatcattagaagcaaaagacctttctctttgtcac
tcgatgatcgctttaggttcatgtacgatgaaactaaatgcaactactgaaatgattccg
gtaacctggccagaattcggtagaatccacccatttgctccggcagatcaggttgcgggt
tactatactgttttcaatgagctagacaaatggttgagtgaaatcactggatttgcagcc
atgagcttacagccaaactctggtgctcagggcgaatatgcaggtctaatggtgatcaga
gcttatcaccaggatcgcggtgaccatcaccgtaatgtggctttaattccttcttctgcg
catggaaccaatccagcttctgcagcaatggccggaatgaaaatcatcatcgttaaatct
ttggagaacggtaatattgacgttgccgatttaaaaatcaaagcagaagagcacaaagaa
aacctttcttgcttaatggtgacttacccatctacacatggtgtatttgaggaaagcatc
atcgacatctgtaacatcatccatgaaaatggcggacaagtttacatggatggcgcaaac
atgaatgctcaggtaggattaaccagcccaggtaacattggtgctgacgtttgtcacctt
aacttacataaaactttctgtatccctcacggtggtggtggtcctggcatgggcccaatc
ggtgtagctaaacacctggttccctaccttccagctcatgcagtggtggatatcaataaa
gaaaaatctattcctgcagtatcttctgcgccttggggctcagcttcgatcttagtgatc
tctcatgcctacatcgcaatgatgggcggagaaggattaatgaatgcaacgaaaaatgcc
attcttaacgcaaactacatgaaagcgcgtttagagcagcattacccagtattgtactct
ggtgcaaatggtcgttgtgcacacgaaatgatcctggattgcagaggcttcaaaaactac
ggcattgaagtagttgacattgcaaaacgtttaatggattatggtttccatgccccaaca
gtatctttcccagtagcaggaacgctaatggtagagcctactgaaagtgagccgaaacat
gagttagacagattctgcgatgctttaattgcgatcagaaaagaagtaactgcagtagaa
aatggtgaattggacaaaactgataacccattgaaaaatgcacctcataccgctaatatt
gtaacagctgatgaatggaatcatggttatagcagacaaacagctgctttcccacttcct
tatgttgcagctttcaaattctggccttcagtaggtagagtgaatgattcctttggcgac
aggtcattggtttgtgcttgcccaccgattgaaagttacatggaagagcaatctgtttaa
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