Pedobacter gandavensis: QG516_12910
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Entry
QG516_12910 CDS
T09013
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
pgj
Pedobacter gandavensis
Pathway
pgj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QG516_12910 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgj03400
]
QG516_12910 (ruvA)
DNA repair and recombination proteins [BR:
pgj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QG516_12910 (ruvA)
RecFOR pathway proteins
QG516_12910 (ruvA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
RecR_HhH
HHH
AEP-TOTE
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
WGQ12519
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Position
complement(3088360..3088944)
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AA seq
194 aa
AA seq
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MFEYIDGKLTFKCPAYIVVEAGGIGYHINISLNTYSSLADAERCKVYLWTHIKEDAHTLY
GFAEEGERRLFLHLISVSGIGPNTGRMMLSSITPIEIQAAIVNGDLPLIQRIKGIGTKTA
QRLVLELQDKLKKEGTGSLIAAPLNNTAREEALSALMMLGFAKQPAEKSIDSAVKNGGAD
LTVEQMIKIALKNL
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaatatattgatggtaagctcacctttaaatgccccgcttatattgttgtggag
gccggaggaattggttaccacatcaatatttcactaaatacttatagcagtctggcagat
gcagaaagatgtaaagtttacctctggacgcatattaaggaagatgcacataccttatat
ggatttgcagaggagggagagcgcaggctcttccttcatctgatttccgtttctggaatc
ggtcccaataccggtaggatgatgctctcttccattacccctatagaaattcaagctgct
attgtaaatggtgatttgcctttgatccagcggattaaaggtattggtacgaaaacggct
cagcgcctcgtgctggaattacaggataaattgaaaaaagaaggtacaggatcactgatc
gccgcaccgcttaataatactgctagagaagaagctttatccgctttgatgatgcttggg
tttgcaaaacaaccggcagaaaaatcaatcgatagtgcagtgaaaaatggaggtgcagat
ttaacagtagaacaaatgataaaaatagctttgaagaacttatag
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