Pedobacter gandavensis: QG516_14130
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Entry
QG516_14130 CDS
T09013
Name
(GenBank) UvrD-helicase domain-containing protein
Organism
pgj
Pedobacter gandavensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WGQ07702
LinkDB
All DBs
Position
complement(3375750..3378989)
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AA seq
1079 aa
AA seq
DB search
MPQQPLKILQASAGSGKTFSLTAHYLTLLLSGETKYREILAVTFTNKATEEMKTRIMEVL
KGFALGQDEVEDYRILVLKAHPDLNKTLLQQRSEAIYKRILHDYSRFSVSTIDGFVQKVI
RGFAFELGLDSGYALEMNFEKVKNELADKLDEQMDHNPNLLQWIIDLALDRISNNVSWNY
RNELTDLAGEIFKERYQPFDNAIQELIEHNDLNVMFGEYSKSTKQQISLFESALKELALR
ATNLFEAANIATDQLKGKSRSPLLAIAKIADGDFLKIETIAKLINEPEEWFKAGADDSLY
YTLNPILDKLYQHYSNGLPEYILAQAFNKNLYYLRLMQEMAVLLKTYRQESGNLLISDAQ
NLLKGITGEDDDNPAFIWEKTGSRYRHFLFDEFQDTSANQWGNFKPLLKNAMAEANGKLI
DHLIVGDVKQSIYRWRNGDWNILHQQAKKDIGETYVVAANLEENYRSTENIISFNNTLFK
ALPILMQRRLNETIGEQSANQKLADWWEEKGFSHIMTDVYEEVTQKITPKTAAGGAIDFS
VLKTDANGASLGRTGFKPEALRRMVETLKRLILEEKRYKAGDACVLVRSNSEAIAVVDAL
MENNINVISGEALLIENNTGVKILINTLKVMAGIPGNTALYKANIISMYAQLREVEVLPD
HLFNLKIKGLEHLIDRLPLQLCENWKSWMQQPLPELLEKLIHAYGLSEAKHSSHLPYLFA
LRDLAGNFARQGEKGITAFLNYWDEEGKRKTLPSSENTDAVQVITIHKSKGLAFKVVMVP
FCNWEINGKPNGIFWVPTADTAYHQLQSIPLKYNKELGQSAVAIPYYEELLYNNMDALNM
LYVATTRTKEYLYITCLGKKTDTVSTIGDVLAMTLQDQLDEDGRFFVDEPVVKKSKTHRV
EESGPTFINLQEYPTSERLSEVFNNNLKRKELEMLTGTNAGREGTILHEVLARSANLEEM
ETVLSSMLNEGFFKAEEMPSLRRQAGNVLAHGELQALLKTSKETINEKSIIDIRGKMYRP
DKVLISGNEVIVIDYKFTLKESDSHIKQVYGYRDLLLAMGYQKVKTYLFYAHSATLKSV
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaacagccgttaaaaatactacaagcttccgcaggatctggtaaaacattcagt
cttacagcccattatttgacccttctattatccggtgaaaccaaataccgggaaattctt
gccgttaccttcaccaataaggcgacggaggagatgaaaaccagaatcatggaggtattg
aaaggctttgccttaggtcaggatgaggtggaagattaccggatattggttttaaaagcg
catccagatttaaataaaacattgcttcagcaaagatcagaggcaatttataagagaatc
cttcacgattacagtcgtttttccgtgagtacaattgatggtttcgttcaaaaggtgatc
agaggttttgcctttgaactgggactagattctggctatgcgctggaaatgaattttgaa
aaagtaaaaaacgagcttgcggataagctggatgagcagatggaccacaatccaaatttg
ctgcagtggatcatagaccttgctttagaccggatcagtaacaatgtaagctggaattac
agaaatgagctgaccgacctggccggcgagatatttaaagaacgttatcagcctttcgat
aatgccattcaggaattaatcgagcataacgacctcaatgtcatgttcggggagtacagc
aaatccaccaagcagcaaatcagtttatttgaaagcgcgctcaaagaactggcattacgg
gccactaatttatttgaagctgcaaatatcgcgaccgatcagctcaaaggaaaatcaagg
tcgcctttattggccattgccaagattgctgatggtgattttttaaaaattgaaacgatt
gctaaattaatcaatgagccggaagagtggtttaaagctggggctgatgatagtttatac
tataccttgaatcccattcttgataaattataccagcattatagcaatggcctgccagaa
tatattcttgctcaggccttcaataaaaatttatactacctgcgcttaatgcaggaaatg
gctgttttgctgaaaacttaccgacaggaaagtggcaacttactcatcagtgatgctcaa
aatctactgaaaggaattacaggcgaagatgatgacaacccagcttttatctgggaaaaa
acgggtagtcgttaccgacatttcttattcgatgaatttcaggatacttctgcgaaccaa
tggggcaactttaagcctttattgaaaaatgcaatggcagaagccaatgggaaactgatc
gaccatttgattgttggcgatgtaaaacaatctatttaccgctggcgcaatggtgattgg
aacatccttcatcagcaggccaagaaagacattggcgaaacctatgtggttgccgcaaat
ctggaagaaaattatcggagtacagaaaatatcatctcctttaacaatacgctttttaaa
gcattgccgatcctgatgcagcgtcgcttaaatgaaacgattggagaacaatccgccaat
cagaaattagcagattggtgggaagaaaaaggcttcagtcacatcatgaccgatgtatat
gaggaagtgactcaaaagatcacgccaaaaacagcagcaggtggtgccattgatttctct
gttttgaaaacagacgccaatggggcaagtttgggccgtacaggcttcaaaccagaggct
ttaaggcgcatggtagagactttaaaacgcctgattctggaagagaagcgttataaagcc
ggtgatgcctgtgttttggtgcgctccaattcggaagccattgctgtagtagatgctttg
atggaaaataacatcaatgtgatttccggtgaggcactcttaattgaaaacaataccggg
gttaaaatcctgatcaacacactaaaagtgatggcaggaatccccgggaataccgctttg
tataaagcgaatatcatcagtatgtatgcacagttgagggaagtagaagtgctgccggat
catttattcaacctgaaaattaaaggcctggagcatttaatcgatcgactgcctcttcag
ctttgtgaaaattggaagagttggatgcagcagccattgccagaattactggaaaaactg
attcatgcttatggactgagtgaggcaaagcattcttcgcatttaccttatttatttgct
ttgagagatctggcagggaatttcgcccggcaaggggaaaaaggcattaccgcctttctg
aactattgggatgaagaaggcaaaagaaaaactttaccatcttcagaaaacaccgatgca
gtacaggtgattaccattcataaatctaaaggactagcctttaaagtggttatggtgcca
ttctgcaactgggaaatcaatggaaaaccaaatgggattttctgggtgcctactgcagat
accgcttaccatcagctgcaaagtatcccattgaaatacaataaagaattaggacaatca
gctgtagccatcccttattacgaagaattgctttacaataatatggatgcgttaaatatg
ctgtatgtggccaccaccaggacaaaagagtatctatatatcacttgcttaggcaaaaaa
acggatacagtaagtactattggggatgttttagccatgactttacaagatcagctggat
gaagatgggcggttttttgtagacgaacccgtggttaagaaaagtaaaacacatcgcgta
gaagaaagcgggccaaccttcatcaatctgcaggaatatccgacttcagaaagactttca
gaagttttcaataataacctcaaaagaaaagagctggaaatgcttactggtaccaatgcg
ggcagggaaggaacgatattgcatgaagtactggccagatctgctaatttggaagaaatg
gaaactgtgctgagtagtatgctcaatgaaggtttttttaaagcagaggaaatgccttct
ttacgtagacaggcaggaaatgtattggctcatggcgaattacaagccttattaaaaacc
agcaaggaaacgatcaatgagaagagcattattgatatccgtgggaaaatgtaccggccg
gataaagtgctgatctctggaaatgaggtcatcgtaatcgattataaatttacgctcaaa
gagagcgattcacatattaaacaagtgtacggataccgcgacttgttattggcaatgggc
taccagaaggtgaaaacctatttgttttatgcccatagtgcaaccttaaaatcagtgtaa
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