Pedobacter gandavensis: QG516_15600
Help
Entry
QG516_15600 CDS
T09013
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00220
Arginine biosynthesis
pgj00240
Pyrimidine metabolism
pgj00250
Alanine, aspartate and glutamate metabolism
pgj01100
Metabolic pathways
pgj01110
Biosynthesis of secondary metabolites
pgj01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
QG516_15600 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
QG516_15600 (carB)
00220 Arginine biosynthesis
QG516_15600 (carB)
Enzymes [BR:
pgj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
QG516_15600 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
GARS_A
ATPgrasp_Ter
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
WGQ07966
LinkDB
All DBs
Position
3733444..3736260
Genome browser
AA seq
938 aa
AA seq
DB search
MPKDTSIRSVLIIGSGPIIIGQACEFDYSGSQAALSLKEEGIEVSIINSNPATIMTDKVI
GDHVYLWPLTVDSIEQILIERKIDAVLPTMGGQTALNLCKEAEERGVWEKYGVKVIGVDV
AAIEKTENRESFRQLMIDIGVGVAPSRIANSFLEGKEAAQEIGYPLVIRPSYTLGGSGGG
FVHKKEEFDHALQRGLEASPTHEVLVEKAVIGWKEYELELLRDSNDNVIIICSIENFDPM
GIHTGDSITVAPAMTLSDRCYQDMRNQAIKMMRAIGTFAGGCNVQFSVNPDNDDIIAIEI
NPRVSRSSALASKATGYPIAKIASKLAIGYNLDEIENQITKTTSAYFEPTLDYVIVKVPR
WNFDKFKGANMELGLQMKSVGEVMAIGRTFIEALQKACQSLEIGRAGLGADGKHNRSIEE
IMHGLEHPSWNRLFLIKDAMSMGVPLESIRKVTKIDKWFLSQIQDLVHLEVELKRYSLNN
IPKDFFFTLKQKGFSDIQIAYLLGNVTEDEVYERRKSLGIRRVYKMVDTCAAEFAAQTPY
YYSTFEEENESIPTDKKKVIVLGSGPNRIGQGIEFDYSCVHGLLAAKESGFEAIMINCNP
ETVSTDFNMADKLYFEPVFWEHVREIIELEKPVGVIVQLGGQTALKMAEKLHENGIKIIG
TSYNDMDVAEDRGRFSDLLKELEIPYPRYGVAENAEEAIVVANEVGYPVLVRPSYVLGGQ
GMSIVINDEDLEKAVVKLLGDLPGNRVLIDHFLDRAEETESDSICDGEDVHIIGLMEHIE
PAGIHSGDSSAVLPPFSLSEKVMNDMETYSKKIAKALNVIGLLNIQFAVKDEKVYVIEAN
PRASRTVPFIAKAYDVPYINIAAKVMLGVNKLKDFTIERKLKGYAIKEPVFSFDKFPEVV
KELGPEMKSTGEAIRFIKDLEDPYFRKLVKDKSMYLSK
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagacacctccatacgctcagtattaattatcggatcgggacctattatcatt
ggtcaagcctgtgaatttgattattcaggatctcaagctgccttatccttaaaggaagag
gggattgaagtttccatcatcaactctaatcctgcaaccatcatgaccgacaaggtgatt
ggggaccatgtgtacctttggcctttaacggtagactctattgagcaaatcctgatcgaa
agaaaaatcgatgcagttttgccaaccatgggtggacaaaccgctttgaacctttgtaaa
gaagcagaagaacgtggggtttgggaaaaatatggtgttaaagtaatcggggtagatgtt
gccgcgattgagaaaactgaaaacagagaatccttccgtcaattaatgattgatataggt
gtaggcgttgctccatccagaattgcaaattccttcctggaaggtaaagaagcagctcag
gaaatcggttatccattggtaatccgtccttcttatacattaggcggttcaggtggtggt
tttgtgcacaaaaaagaagagttcgatcacgctttacaacgcggattagaagcttctcca
acgcatgaagtattggtagagaaagctgtaatcggatggaaagaatacgaattggaattg
ctgagagatagtaatgacaacgtgatcatcatctgttcaattgaaaactttgatccaatg
ggtatccataccggcgactcaatcactgtagcaccagcaatgactctatccgatcgctgc
taccaggatatgcgtaaccaggccatcaaaatgatgcgtgctattggtactttcgctgga
ggctgtaacgttcagttctctgtgaatcctgataatgacgacattatcgccatcgaaatc
aacccaagggtgtcacgctcttcggcattggcaagtaaagcaacaggatatccgatcgca
aaaatcgcttctaaattagccatcggttataacttagacgagatcgaaaatcaaattaca
aaaactacatctgcatatttcgaacctacattagactatgtaatcgtgaaagtacctcgc
tggaactttgataaattcaaaggtgccaacatggaactaggattacaaatgaagtcggtt
ggagaagtaatggctatcggccgtaccttcatcgaagccctacaaaaagcttgtcagagt
ttagaaattggcagagccggattaggtgcagatggtaaacataacagaagtatcgaagag
atcatgcacggtttggagcatccaagctggaaccgcctgttcttaattaaagatgccatg
tcgatgggtgttcctttggagtctatccgtaaagtaactaaaatcgataaatggttcctt
tctcagattcaggatttagtacacctggaagttgagctaaaaagatactctctgaacaac
attcctaaagatttcttcttcacattgaaacaaaaaggattctctgacatccagatcgct
tacctgttaggtaatgtaacggaagatgaggtttatgagagaagaaaatccctaggcatc
agacgtgtgtataaaatggtagatacttgtgcagcagaattcgcagcgcaaactccatat
tactactctacgtttgaagaagaaaatgaatctatcccaacagataaaaagaaagtaatt
gtattgggttcaggtcctaaccgtatcggtcaggggattgaatttgattactcttgcgta
catggtctgcttgctgctaaagaaagcggttttgaagcaatcatgatcaactgtaacccg
gagacagtttctacagatttcaacatggctgataagttgtactttgagccagtattctgg
gaacatgttcgtgaaattatcgaattagagaaaccagtaggggtaatcgttcaattgggt
ggacagactgccttgaaaatggctgaaaagcttcatgagaatggtattaaaatcatcggt
acatcttacaatgacatggatgttgcggaagatagaggtcgtttctcagacttattaaaa
gaattagagattccttatccaagatatggtgttgctgaaaacgcggaagaggcgattgta
gttgctaatgaagtaggatacccggtattggttagaccaagttatgtattgggtggacaa
ggaatgagcatcgtaatcaacgacgaagacctggagaaagcagtagttaaactactaggt
gatcttccaggaaaccgtgtattgattgaccacttcctggacagagcagaagaaaccgag
tcggattctatctgtgacggcgaagacgtacacatcatcggattgatggagcatattgag
cctgcaggtattcactctggtgattccagcgcagtattgccgccattcagcttatctgaa
aaggtaatgaacgatatggaaacttactctaagaaaatcgcgaaagcattaaacgtaatc
ggattgttaaacatccagtttgcagtcaaagacgagaaagtttatgtgatcgaagcgaat
cctagagcttcaaggacggttcctttcattgcgaaagcttatgatgttccttatatcaat
atcgctgctaaagtgatgttaggtgtaaacaagctgaaagactttacgatcgaaagaaaa
cttaaaggttatgcgattaaagagccagtattctcttttgataagttccctgaagtagtg
aaagaactaggtccagagatgaagtctacaggagaagcgatcaggtttattaaagacctg
gaagatccttacttcagaaagctagtaaaagacaaatcgatgtatttatcgaaataa
DBGET
integrated database retrieval system
