Pedobacter gandavensis: QG516_15635
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Entry
QG516_15635 CDS
T09013
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgj03032
]
QG516_15635
03036 Chromosome and associated proteins [BR:
pgj03036
]
QG516_15635
03400 DNA repair and recombination proteins [BR:
pgj03400
]
QG516_15635
DNA replication proteins [BR:
pgj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QG516_15635
Chromosome and associated proteins [BR:
pgj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
QG516_15635
DNA repair and recombination proteins [BR:
pgj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
QG516_15635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
WGQ07973
LinkDB
All DBs
Position
complement(3742944..3743246)
Genome browser
AA seq
100 aa
AA seq
DB search
MTKADIISEISTKTGIEKVDVQETVEAFFKVIKNSMIGGENVYVRGFGSFVVKKRAQKTA
RNISKNTAIIIPEHFVPSFKPAKVFVDKVKNNSKIVSVEA
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgactaaggcagatattatttcagaaatatcaacgaaaacaggaattgaaaaggtagat
gtacaagaaaccgttgaggcatttttcaaggtcatcaaaaacagcatgattggtggagaa
aatgtatatgttaggggttttggtagttttgttgttaaaaaaagagcacaaaaaactgca
aggaatatttctaaaaacactgcaattattatcccggaacacttcgttccaagctttaaa
ccagcaaaagtatttgttgataaagtgaaaaataattcaaaaatagttagcgtagaagct
taa
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