Pedobacter gandavensis: QG516_15745
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Entry
QG516_15745 CDS
T09013
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
QG516_15745
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgj02000
]
QG516_15745
Enzymes [BR:
pgj01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
QG516_15745
Transporters [BR:
pgj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
QG516_15745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_21
AAA
AAA_22
AAA_25
AAA_16
S_4TM
Motif
Other DBs
NCBI-ProteinID:
WGQ07995
LinkDB
All DBs
Position
complement(3765830..3767650)
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AA seq
606 aa
AA seq
DB search
MKTYFRLLSFAKPIEKFAIPYIIATLLAVFFNTFNFTLLAPLLDTLFFDQSSATGAMKVA
GQWDLLAQFKNYIASTVEHFGKEEALKIVCAVILASVLLSNFFRYLSQRFMEDLRVHTLL
NIRKTVFNNVMNMHIGFFNNERKGDIISKVSSDVQVVQFTVTNTLQVVFKEPLQLLFYVF
VLFSISVKLTLFSLLVIPVSGFIISKIVKRLKEQATATHESFAKMIGFLDEALSGIKIVK
AFNSTERTKEKFHAENQFYSNLNRKMVRRQQLASPVSQSLGIFVIVIIVLYGGGLVLSGS
KEFTASDFIMYIAVFSQVMQPVKAISDSFSGIHSGIAAGERVLELIDTEPQVVNKPGAIE
LKEFKESLTFENVSFSYQDKVVLNNISLTVPKGKTIALVGPSGGGKSTLMDLIPRFHDPK
SGVIKIDGLNYKDLSVESIRSKMGIVNQESFLFNDTIFNNIAFANPNASEEEVITAAKIA
NAHEFILGQEQGYQTYVGDRGGRLSGGQRQRICIARAVLANPPIMLLDEATSALDTESEK
LVQQALNNLMQNRTSIVIAHRLSTIQHADTIVVIEQGEIKETGSHTELMSHNGLYRRLID
MQAFTD
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaagacatattttagattactgtcctttgcgaagcctattgagaagttcgccatccct
tatattattgctacattattagctgtatttttcaacaccttcaactttacgctgctagca
cctttgttagataccctgttttttgaccaaagcagtgctacaggagcaatgaaagttgct
ggacaatgggatttattggcccagttcaaaaactatatcgcttccaccgtagagcacttt
ggaaaagaagaagccttaaaaatcgtatgtgcggtaattttggcttccgtattactttct
aacttcttccgttatttatcacagcgattcatggaagacttgagggtacataccttgctg
aacattagaaaaaccgtatttaacaatgtgatgaacatgcacattggctttttcaacaac
gaaagaaaaggtgatatcatctctaaagtatcatctgacgtacaggtagtacagtttact
gtaaccaataccttacaggtggttttcaaagagcccttgcaattgcttttttacgtgttt
gtattgttcagcatttccgtaaagctgactttgttctcactattagtgattccggtatct
ggtttcatcatcagcaagattgtgaagcgattgaaagaacaggcaactgctacacatgaa
tcctttgcaaaaatgattggcttcctcgatgaggcattgagtggcataaaaatcgtaaaa
gcctttaactctactgaaaggactaaagaaaaattccacgcggaaaaccagttctattcc
aacctgaacagaaaaatggtgagaagacagcagctggcttctccagtatcacaatccctg
gggatttttgtcattgtaatcattgtattgtacggtggtggcttggtgctcagcggaagt
aaagagtttactgcttcagatttcatcatgtatattgcggtattctctcaggtgatgcag
ccagttaaagccattagtgactcctttagcggcattcactcgggtattgctgccggcgaa
agggtattggaattaattgatacggagccacaggtggtcaacaaaccaggtgctatcgaa
ttaaaagaattcaaagaatcgctgacttttgaaaatgttagtttcagctatcaggataaa
gtcgttttaaacaacattagcttaaccgttcctaagggaaaaaccattgcattggttggt
ccgtctggtggtggaaagagcactttaatggacttaatccctcgtttccatgacccaaaa
tcaggcgtaattaaaatcgacggactgaattataaagacttaagtgtggaaagtatccgc
agtaaaatgggaattgtaaatcaggaatctttccttttcaatgatactatttttaacaac
atagcctttgccaatcctaatgcttcagaagaagaagtgattaccgcagcaaaaattgcc
aatgcacatgaattcatcctagggcaggaacaaggttaccaaacttatgtaggtgatcgg
ggcggcaggttatccggcggacaaagacaaaggatttgcattgccagagcagtattggcc
aatccgccaatcatgttactggatgaagcgacttctgctttagatacagaatctgaaaaa
ctggttcaacaggctttaaacaacctgatgcaaaacagaacctctattgtgattgctcac
cgtttgagcaccatacaacatgcggatacgattgtggtaattgagcagggtgaaatcaaa
gaaaccggaagtcatactgaattaatgagtcataatggcttatacagacgattaatagac
atgcaggcatttactgactaa
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