Pedobacter gandavensis: QG516_15765
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Entry
QG516_15765 CDS
T09013
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgj02000
]
QG516_15765
Transporters [BR:
pgj02000
]
Other transporters
Pores ion channels [TC:
1
]
QG516_15765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
TSP_3
RACo_linker
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
WGQ12581
LinkDB
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Position
3770846..3772171
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AA seq
441 aa
AA seq
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MNYSTLKKGLAVSFVALMGATTLANAQETPATSSSAKVFGGRGQYRSWSIGVNGGVLSPF
VAIGGSNDFTNFDVNLGYGISLRKQLGHAFGLEGNIFRGKVSGTNKDAPGGAVNGIKAFE
TEMQYSIDLRGVVNVATVDFLRRENSVNFFVTAGYGLVAYNPIVDGKDNKGKFGDDKDKD
FIKEAYIPVGAGVKFKVSDRVSFNLGYTMHFIDGDNFDGVYAKATTKDKFSYGYAGLEFS
LGSKSKPNLDWVNPLALMYDELKDPSLRQEVEALKTRVSNVEKSVEDLKKDSDGDGVADQ
FDKCPGTPAGVAVDGSGCPLPKVEVAVVDNSNVTGFERIQFEFNSSVLKTDSYPTLDKLS
SVLRDGGGKVTVNGYASSEGTAAYNLKLSKDRANSVKTYLVNSGVNASQVITKGHGEANP
IASNDTEEGRIQNRRVETARN
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaattattctactttaaaaaagggtcttgcagtctctttcgtagcgttaatgggagca
acgactcttgctaatgcacaagaaactccagcgacttcatcttcagccaaggtatttggt
ggaagaggccagtacagatcatggtcgatcggtgtaaacggtggtgttttatctccattt
gttgctatcggtggatcaaatgactttactaacttcgatgtaaacttaggttatggtatc
tctttgagaaaacaactaggtcatgcattcggattagaaggtaacattttccgtggtaaa
gtttcaggtactaacaaagacgctccaggcggtgctgttaatggtatcaaagctttcgaa
actgaaatgcagtactctattgacttaagaggtgttgttaacgtagctactgtagatttc
ttacgtcgtgagaactcagttaacttcttcgtaactgctggttacggtttagttgcttac
aacccaatcgttgacggaaaagacaacaaaggtaaatttggtgatgacaaagataaagac
ttcattaaagaagcttatatcccagttggagctggtgttaaatttaaagtatctgaccgt
gtgtcatttaacttaggttacacgatgcacttcatcgatggtgataattttgacggagta
tatgcaaaagcaactactaaagataaattctcttacggttatgcaggtctagaattctct
ctaggttctaaatctaaaccaaaccttgactgggttaatcctttagctttaatgtatgat
gaattgaaagatccttcattacgtcaagaagttgaagcattgaaaactcgtgtatctaac
gttgaaaaatctgttgaagatttgaaaaaagattctgatggtgacggtgttgctgatcaa
ttcgataaatgtccaggtactccagcaggagttgcagttgatggttcaggctgtcctcta
cctaaagtagaagttgctgtagttgacaatagcaatgtaactggtttcgaaagaatccaa
tttgaatttaactcttcagttcttaaaactgattcataccctactttagataaattatct
tctgtattgcgtgatggtggtggtaaagtaactgttaacggttatgcatcaagcgaaggt
actgctgcttacaacttaaaattatctaaagacagagccaactctgtgaaaacttactta
gttaactctggagttaacgctagtcaagtaatcactaaaggtcatggtgaagctaatcca
atcgcttctaacgatactgaagaaggtcgtatccaaaaccgtcgtgttgaaactgctaga
aactaa
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