Pedobacter gandavensis: QG516_15870
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Entry
QG516_15870 CDS
T09013
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
QG516_15870 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgj01007
]
QG516_15870 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgj03016
]
QG516_15870 (hisS)
Enzymes [BR:
pgj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
QG516_15870 (hisS)
Amino acid related enzymes [BR:
pgj01007
]
Aminoacyl-tRNA synthetase
Class II (A)
QG516_15870 (hisS)
Transfer RNA biogenesis [BR:
pgj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
QG516_15870 (hisS)
Prokaryotic type
QG516_15870 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2
tRNA-synt_2d
DUF7650
Motif
Other DBs
NCBI-ProteinID:
WGQ08019
LinkDB
All DBs
Position
3794894..3796279
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AA seq
461 aa
AA seq
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MSNIKPSLVKGTRDFSPQEMVKRNHIFDTIKTVFKKYGYAEIQTPTMENLSTLTGKYGDE
GDKLIFKILNSGDFLSKAKPELLAAANSNALTSSISEKALRYDLTVPFARYVVMHQNDIS
LPFKRFQVQPVWRADRPQKGRYREFYQCDVDVVGSDSLLNEAEFILIYQEALSNLGLKDF
TIKLNNRKILTGIAEIIGKPELIIDMTVAIDKLDKIGLDGVSKELLERGFTEADLEKLKP
VILLQGSNEEKLQSLRNVLAGSTTGMNGIEELETVFKYLQGLLQTTPDLRPDVELDITLA
RGLNYYTGCIFEVKTNEAAMGSIGGGGRYDDLTGMFGLKGLTGVGISFGADRIYDVLLEL
NLFPESAAAGTKVLISNFDAAAELYALPIVQQLRNADIAAELYPTAAKLKKQMSYADDKK
IPYVILIGSDELESGLLTLKDMQSGVQEKLSLNDILEKIKN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatattaaaccttctctagttaaaggaacccgtgatttttcaccccaggaaatg
gtcaaacgcaatcatatttttgataccataaagacggtatttaaaaagtatggttatgcc
gaaatacaaaccccaacgatggaaaacctaagtactttaacaggtaaatatggtgatgag
ggcgataaactgatctttaagatcttaaacagtggtgatttcctttctaaagcgaaacca
gaactgctggcagctgccaactcaaatgccctgacttcctcgatttctgaaaaagcattg
aggtatgatttaacggtaccttttgcacgttacgtagtgatgcaccagaatgacatttcg
ctgccttttaagcgctttcaggtacaaccggtatggagagctgaccgaccgcagaaaggc
cgctacagagagttctatcaatgtgatgtggacgtggtaggttcagacagcttgttaaat
gaggcagaattcattctgatctatcaggaagcattgagtaaccttggtcttaaagacttc
acgattaaattaaataaccgcaaaatccttactggaattgcagaaatcataggtaaacca
gagttgatcattgacatgacggtagccattgataagctggataaaatcggactggacggc
gtaagtaaagagctgttagaacgcggatttacggaagcagacctggagaaattgaagcca
gtcattctattgcagggtagcaacgaagaaaaactgcaaagtttacgtaatgtattggca
ggttcaacaacgggtatgaatggaattgaagagctcgaaacggtattcaaatacctgcaa
ggattgctgcagaccacgccggatcttcgcccggatgtagagctggacattactttagca
cgtggcttaaactactataccggctgtatctttgaagtgaaaacaaatgaagctgctatg
ggcagtattggtggaggtggtcgttatgatgacctgaccggtatgtttggcctgaaaggt
ttaaccggggttgggatttcttttggtgcagaccgcatctatgatgtgttgctggaactg
aaccttttccctgaatctgctgcggcgggaacgaaagtcctgatcagtaactttgatgca
gcggcagaattatatgccttgcctatcgtacagcagcttagaaatgccgatatcgctgca
gaactatatccgactgctgcaaagctgaaaaagcaaatgagctatgcggatgataagaag
attccttatgtgattttaattgggagtgatgagctggaaagcggccttttaaccctaaaa
gatatgcagagcggcgttcaggaaaaactatccctgaatgatattctggagaaaattaaa
aactaa
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