Pedobacter gandavensis: QG516_16210
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Entry
QG516_16210 CDS
T09013
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QG516_16210 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgj03019
]
QG516_16210 (groL)
03110 Chaperones and folding catalysts [BR:
pgj03110
]
QG516_16210 (groL)
03029 Mitochondrial biogenesis [BR:
pgj03029
]
QG516_16210 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgj04147
]
QG516_16210 (groL)
Enzymes [BR:
pgj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
QG516_16210 (groL)
Messenger RNA biogenesis [BR:
pgj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
QG516_16210 (groL)
Chaperones and folding catalysts [BR:
pgj03110
]
Heat shock proteins
HSP60 / Chaperonin
QG516_16210 (groL)
Mitochondrial biogenesis [BR:
pgj03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
QG516_16210 (groL)
Exosome [BR:
pgj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
QG516_16210 (groL)
Exosomal proteins of other body fluids (saliva and urine)
QG516_16210 (groL)
Exosomal proteins of breast cancer cells
QG516_16210 (groL)
Exosomal proteins of colorectal cancer cells
QG516_16210 (groL)
Exosomal proteins of bladder cancer cells
QG516_16210 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
Motif
Other DBs
NCBI-ProteinID:
WGQ08086
LinkDB
All DBs
Position
complement(3874098..3875738)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKQVRYNVEARDALKRGVDILANAVKVTLGPKGRNVIIDKKFGSPAITKDGVTVAKEIE
LKDPIENMGAQMVKEVASKTADIAGDGTTTATVLAQAIVTAGIKNVAAGANPMDLKRGID
KAVTAIVANLKAQSQTVGEDNNKIKQVASISANNDEVIGSLIAEAMGKVGKDGVITVEEA
KGTETEVKTVEGMQFDRGYLSPYFVTNADKMEAELENPYILIYDKKISNMKELLPILEKQ
VQTGKPLLIIAEDLDGEALATLVVNKIRGSLKVVAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGYKLENADLTYLGTAEKVIVDKDNTTIINGAGSSDDIKARVNQIKSQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVAFI
RAIEALEGMKGVNDDETTGIAIVKRAIEEPLRQICQNAGIEGSIVVQKVKEGTADFGYNA
RTDVYENLIAAGVIDPTKVGRVALENAASIAAMLLTTECVLADDPEDAPAGAGMPPMGGG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaagtaagatataatgtagaagcccgtgacgccctgaaaagaggtgttgac
attttggctaatgcggtaaaagtaactctaggtccaaaaggacgtaacgtaattattgac
aagaaattcggttcaccagcgattactaaagatggtgtgactgtagcgaaagagatcgaa
ttaaaagatcctatcgaaaatatgggtgctcaaatggtaaaagaagttgcttctaaaact
gcagatatcgcaggtgatggaacaacaactgcaactgtattggcacaagcaatcgtaact
gcaggtattaaaaacgttgctgctggtgcaaatccaatggatttgaaacgtggtattgac
aaagccgttactgcaatcgttgcgaacttaaaagcacaatctcaaaccgtaggtgaagac
aataacaaaatcaaacaagttgcttctatttcagcaaacaatgatgaggtgattggttcc
ctaattgctgaggcaatgggcaaagtaggtaaagatggtgtaattactgttgaagaagca
aaaggtactgaaactgaagtaaaaacagtagaaggtatgcaattcgaccgcggttactta
tctccatactttgtaactaacgcagataaaatggaagcggaattagaaaacccttacatc
ttaatctacgacaaaaaaatcagcaacatgaaagaattgttgccaattttagagaaacaa
gtacaaacaggtaaaccattattgatcattgcggaagacttagatggcgaagcattggct
acattggtagtgaacaagatccgtggatctctgaaagttgtggctgttaaagctccaggt
ttcggtgaccgtagaaaagcaatgttagaagacatcgcgatcttaactggtggtactgta
atttctgaagaaagaggttataaattagaaaatgctgaccttacttacctaggtactgct
gagaaagttattgttgataaagacaatacaacgatcatcaatggtgctggtagttctgat
gacatcaaagctcgcgtgaaccagattaaatctcaaatcgagaccactacatctgattat
gacaaagagaaattacaagagcgtttggctaaattagctggcggtgttgcagttctttat
gttggtgcagcttctgaagttgaaatgaaagagaaaaaagaccgtgttgatgatgcttta
catgccactcgtgcagctgtagaagaaggtatcgttgcaggtggtggtgttgctttcatc
cgcgctatcgaagctttagaaggcatgaaaggtgtgaatgatgatgagactactggtatc
gctatcgttaaacgcgcaatcgaagagccattacgtcaaatctgtcagaatgcaggtatt
gaaggttctatcgtagtacaaaaagttaaagaaggtactgctgacttcggttacaatgca
cgtactgatgtatatgaaaacttaatcgctgccggtgtaatcgatccaactaaagtaggt
cgtgtagcactagaaaacgcagcttctatcgcagcgatgttgttaacaacagaatgcgta
ttagctgacgatccagaagatgctcctgctggtgcaggtatgcctccaatgggtggtggt
ggtatgggtggaatgatgtaa
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