Pedobacter gandavensis: QG516_16590
Help
Entry
QG516_16590 CDS
T09013
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00521
Streptomycin biosynthesis
pgj00523
Polyketide sugar unit biosynthesis
pgj00541
Biosynthesis of various nucleotide sugars
pgj01100
Metabolic pathways
pgj01110
Biosynthesis of secondary metabolites
pgj01250
Biosynthesis of nucleotide sugars
Module
pgj_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QG516_16590 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QG516_16590 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QG516_16590 (rfbC)
Enzymes [BR:
pgj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
QG516_16590 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
MAAL_N
Motif
Other DBs
NCBI-ProteinID:
WGQ08158
LinkDB
All DBs
Position
complement(3961908..3962462)
Genome browser
AA seq
184 aa
AA seq
DB search
MNILETPIADLLIIEPKVWKDNRGYFYESFNAKTLSEAGINVNFVQDNQSFSQKGTLRGL
HAQKAPFAQGKLVRVIQGKVLDVAVDIRKDSATYGQHFSIELSGENHRQLWVPPGFLHGF
LTLEDQTIFTYKVSNYYDKESEIGVIWNDADLNINWSKDIPLEDLLLSDKDLVLPGFKDF
SSPF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttagaaacccctattgctgatctgctgatcatagagcctaaagtctggaaa
gataaccgtggctatttctatgaaagtttcaatgcaaaaaccctttcagaagctggtatt
aatgtcaactttgttcaggacaatcaatctttctctcagaaaggtactttacgtggatta
catgcccaaaaagcgcctttcgcacaaggaaagctggttagagtgatccaaggaaaggta
ttagacgttgcagtagacatcagaaaagactctgctacttatggacagcactttagcatc
gagctaagtggagaaaaccatagacaactctgggtaccaccaggctttttacatggcttc
ttaacactggaagatcaaacaatcttcacttataaagtaagtaattactacgataaggaa
tcggaaataggggtcatctggaatgatgccgacttaaacatcaactggagtaaggacatt
ccattggaagatcttttactttcagataaagatttggtgttgcctggattcaaagatttc
agcagcccgttttaa
DBGET
integrated database retrieval system
