Pedobacter gandavensis: QG516_16920
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Entry
QG516_16920 CDS
T09013
Name
(GenBank) glycoside hydrolase family 88 protein
KO
K15532
unsaturated rhamnogalacturonyl hydrolase [EC:
3.2.1.172
]
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
QG516_16920
Enzymes [BR:
pgj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.172 unsaturated rhamnogalacturonyl hydrolase
QG516_16920
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_88
Motif
Other DBs
NCBI-ProteinID:
WGQ08222
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All DBs
Position
complement(4038669..4039820)
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AA seq
383 aa
AA seq
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MNNRNLMPRIGRLIFSLFFSATTTLYAQSNPSDLKNWPKGSSPQEIGSRVAARFVQTPHT
NFNKPGPPRVITYPESVAWYGALTFAKSSANKPLLKQLADRFEPFFGVEQKMIPTPDHVD
YSVFGAVPLELYKQTKDKKYLDMGLAIADKQWGPPEGPRVKPESHEFYNKGYTWQTRLWI
DDMYMITALQAQAFRVTGNQQYIDRAAKEMVFYLDELQKPNGLFYHAPDVPYYWGRGDGW
MAAGMAELLSSMPKQHSYRPRILKGYLDMMASLLKYQGKNGMWNQLIDDPEAWPETSSTG
MFTFAMITGVKNGWLDKDIYGKAARNGWLGLISYLNADADISDVCEGTNKKDDRQYYLDR
KRNTGDLHGQAPILWCATALLSR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacagaaacctcatgccccgcatcggcagacttatcttttcgttattcttttct
gcgactaccactttatatgcacaatccaacccctcggatttaaagaactggccaaagggt
agttctccacaggaaatcggcagccgggttgccgcccgatttgtccagactcctcacacc
aactttaacaaacctggaccaccaagagtgatcacttatccggaatctgtggcctggtat
ggcgcccttacttttgcaaaatccagtgccaataaacctttgcttaagcaattggcagat
cgttttgagccattttttggagtagaacagaaaatgattcctacaccagaccatgtggat
tacagtgtatttggtgccgtacctttagagctatacaaacagacaaaagataaaaaatac
ctggatatgggacttgctattgccgacaaacaatggggtccaccggaaggcccgagggta
aaaccagagtctcatgaattctataataaaggttatacctggcaaacacggctatggatt
gacgatatgtatatgatcactgctttgcaggcacaagcttttcgcgttacaggtaatcag
caatatatcgaccgtgcggccaaagaaatggtgttttatctggatgaacttcaaaaacca
aacggcttattttaccatgcgccagatgtgccttattattggggcagaggtgatggctgg
atggcggcaggtatggccgaattgcttagttctatgccaaaacaacattcctacagacct
agaatcctaaaaggatacctggatatgatggcttcgctgcttaaatatcaaggtaaaaat
ggcatgtggaatcagctgatcgacgatccggaagcatggccggaaacttcatcaacgggc
atgtttactttcgccatgattactggtgtaaaaaacggctggctggacaaagatatttat
ggaaaagcagcaagaaatggctggctgggattgatcagttacctgaatgctgatgctgat
atttcggacgtatgtgaaggaacaaataaaaaggacgaccgccaatattacctggatcgg
aaacggaatactggagatttacatggacaagcacccattttatggtgtgccactgcatta
ttgagccgttaa
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