KEGG   Pedobacter gandavensis: QG516_16960
Entry
QG516_16960       CDS       T09013                                 
Symbol
recO
Name
(GenBank) DNA repair protein RecO
  KO
K03584  DNA repair protein RecO (recombination protein O)
Organism
pgj  Pedobacter gandavensis
Pathway
pgj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pgj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    QG516_16960 (recO)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgj03400]
    QG516_16960 (recO)
DNA repair and recombination proteins [BR:pgj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     QG516_16960 (recO)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      QG516_16960 (recO)
SSDB
Motif
Pfam: RecO_N RecO_C
Other DBs
NCBI-ProteinID: WGQ08228
LinkDB
Position
complement(4044944..4045669)
AA seq 241 aa
MLHKTRGIVLKTTLYSESSVVVQMFTEKFGMQSYLINGVKKPKAKIRMNMLQPLHLVDMV
VYHKVNSSIQRISELRPSPIFSSIPYDILKSTMAMFLNEVLYKSIRQQMTDEYLFDFIFN
AVCWFDESQGTNVNFHLAFLLKLSRYLGFAPSSQTKSDQSYFDLQEGEFKSLPPVHPHFI
DKDDAALFISLFILPFEKIIEIKLDNKTRRRILDKILIYYTLHTASFGEIRSHQVLEDIL
S
NT seq 726 nt   +upstreamnt  +downstreamnt
atgctgcataaaacacgtggaatcgtattaaaaacgacactgtacagtgagagcagtgtg
gtggtacaaatgtttaccgagaaatttggcatgcagtcttacctgatcaacggggtgaaa
aaaccgaaggcaaagatcagaatgaacatgctgcagcccctgcatctggtagatatggtg
gtttaccataaagtaaactccagcattcaacgcatttctgaactgagaccatctcctatt
tttagcagtattccttacgacattctgaaaagtacaatggccatgttcctgaatgaagtg
ctgtataaaagcatccgtcagcagatgaccgacgagtatttatttgattttatctttaat
gcggtctgctggtttgatgaatctcagggtacaaatgtgaattttcacctggcttttctg
ttgaaattatcgcgttacctcggttttgcaccaagttcacagaccaaaagtgaccaaagt
tatttcgatttacaagaaggagagtttaaatctttacctcccgtacacccacactttatc
gataaggacgacgcagcactctttatttcactatttattttgcctttcgaaaaaataatt
gaaataaaattagataataaaacccgtcgtagaatccttgataaaatactgatttactat
accttacacacagcttcttttggagaaatccgctcacatcaggttctggaagatatatta
tcataa

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