Pedobacter gandavensis: QG516_16970
Help
Entry
QG516_16970 CDS
T09013
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgj03009
]
QG516_16970 (rlmF)
Enzymes [BR:
pgj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
QG516_16970 (rlmF)
Ribosome biogenesis [BR:
pgj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
QG516_16970 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Motif
Other DBs
NCBI-ProteinID:
WGQ08230
LinkDB
All DBs
Position
4046226..4047179
Genome browser
AA seq
317 aa
AA seq
DB search
MSIEKNELHPRNKHRSRYDFPELIKTLPELRPFVTVNPYGDESIDFSNPMAVRLLNQALL
KHFYQIDYWDIPEGYLCPPIPGRADYVHYLADLLASVNAGAVPQGGKIKGLDIGIGANCI
YPIIGHQEYGWSFVGSDVDSYAIKSAKNLATINPALLASVFPRLQAHKNQIFKGILKPGE
LFDFTMCNPPFHASAEEARAGSQRKVRNLGTQRGKIPVLNFGGQQAELWCDGGEVGFIRK
MIQESETIGKQCFWFTTLVSKSLHLPFIYTALDKVNPVQIRTIEMAQGQKISRFLAWTFL
TTEEQERWKADRWSRKK
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatagagaaaaacgagttacacccaagaaacaagcaccgttccaggtatgatttt
ccggaactaattaaaacattgccggaattacgtccttttgtgacggtcaatccatacggt
gatgagtccatagatttttcaaatcccatggcggtgaggttgttgaatcaggcgttactg
aaacatttctatcagatagactattgggatattcctgaaggatacctttgtccgccgatt
ccaggaagagcagattatgtgcattacctggcagatttattggcttccgtaaatgctggg
gctgttcctcagggcggaaaaattaaaggcctcgatattggtatcggcgccaattgtatt
taccccatcattggacatcaggaatatggatggtcatttgtaggctctgatgtagattct
tacgcaataaagtctgctaaaaacttagctacgattaatccagctttattggcttccgta
tttccaagattacaagcgcataaaaatcagatttttaaaggcatattgaaaccgggagag
ctcttcgatttcacaatgtgtaatccaccattccatgcttcagcggaagaggcaagagca
ggatcacaaagaaaagtgaggaatttaggtacgcagagaggtaaaattcctgtgttgaat
ttcggtggacagcaggctgaattgtggtgtgacggtggggaagttggtttcatcagaaaa
atgattcaggaaagtgaaaccatcgggaaacaatgtttttggtttaccacactggtttct
aaaagcttgcatcttccttttatctatactgctttggataaagttaatccggtacaaatt
agaacaatagagatggcacaaggacagaagatcagccgttttctggcctggacattttta
actactgaggagcaggagcgttggaaggctgatcgctggtctcgaaagaaataa
DBGET
integrated database retrieval system
