Pedobacter gandavensis: QG516_17080
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Entry
QG516_17080 CDS
T09013
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
QG516_17080 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgj01007
]
QG516_17080 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgj03016
]
QG516_17080 (cysS)
Enzymes [BR:
pgj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
QG516_17080 (cysS)
Amino acid related enzymes [BR:
pgj01007
]
Aminoacyl-tRNA synthetase
Class I (G)
QG516_17080 (cysS)
Transfer RNA biogenesis [BR:
pgj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
QG516_17080 (cysS)
Prokaryotic type
QG516_17080 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
CysS_C
Motif
Other DBs
NCBI-ProteinID:
WGQ08252
LinkDB
All DBs
Position
4072194..4073654
Genome browser
AA seq
486 aa
AA seq
DB search
MNTGLQLYNTLSRKKELFEPLNAPHVGMYVCGPTVYSDVHLGNCRTFISFDLIFRYLKYS
GYKVRYVRNITDAGHLEGDRDEGDDKFAKRAKLEQLEPMEIVQKYTLGFHDVLRMFNTLP
PSIEPTATGHIIEQIEMIKEIMNNGYAYESNGTIYFDVEKYSETYNYTILTNRNLEDMLA
NTRELGGQNEKRGRLDFALWIKAKPETLMRWASPWGEGFPGWHIECSAMSAKYLGAEFDI
HGGGMDLAATHHTNEIAQSEACSHKQPAKYWMHTNMLTVNGTRMSKSAGNGFLPEQLFSG
DHALLEKGFSPMTVKFFMLQAHYRSTLDFSNEALDASEKGFKRLMNALSLLDKLTPAESS
DFEIDPIIDNCVKAMNDDFNSPVVIAELFEASRIINTVYDGKGKISAAELDKLKQLMQDF
VYDIFGLKDEETSNIALNSVLDMVIDLRQTAKENKDYATSDKIRLGLQSMGIQLKDSKEG
TTWSKA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaggcttacagctctataataccctatcacgtaaaaaagaactttttgaaccg
ctaaacgcacctcatgtaggtatgtatgtgtgcggacctactgtttacagcgatgtgcac
ctgggcaattgtcgtacgttcatctcttttgatttgatcttcaggtatttgaaatacagt
ggctataaagtacgctatgtgcgcaacattaccgatgccggccatttggaaggtgatcgt
gatgaaggagatgataaatttgcgaaaagagcgaaactggagcaattggaaccaatggaa
attgtacaaaaatacactttgggattccatgatgtattgagaatgttcaacacattgccg
ccaagcatcgagcctaccgctaccggacacatcatcgagcagattgaaatgatcaaagag
atcatgaacaatggttatgcttatgaatccaatggaaccatctattttgatgtagaaaaa
tatagtgagacttataactataccattcttaccaatagaaacctggaggatatgctggcg
aataccagagaactgggtggacaaaatgagaaacgcggcaggttagatttcgcactttgg
attaaagcaaaaccagaaacactaatgcgctgggcttccccatggggagaaggttttcca
ggatggcatattgaatgttctgcaatgagtgccaaatatcttggtgcagaattcgatatt
catggcggtggaatggaccttgcagcaacgcaccatacgaatgaaattgcccagtctgaa
gcttgcagtcataaacaacccgcaaaatactggatgcataccaatatgctgaccgttaac
ggtacgaggatgtcgaaaagtgcaggtaacggatttttaccggaacaattgtttagtgga
gaccatgctttactggaaaaaggattcagcccgatgacggttaaattcttcatgttacag
gcgcattaccgcagtacacttgacttttcaaatgaagctttagatgcttcggaaaaagga
tttaaaaggctgatgaatgccttgagtttactcgataaattgacaccagctgaaagcagc
gatttcgaaatcgatccgatcatcgacaattgcgtcaaagcaatgaatgatgatttcaac
agtccggtggtgattgcagaacttttcgaagccagcagaatcatcaatacggtgtatgat
ggaaaaggaaagatctctgcagcggaactggacaagcttaaacaactgatgcaggatttt
gtgtatgatattttcggactaaaagacgaggagacttctaatatcgcattaaattcagta
ttagatatggtgatcgacttacgtcagacggcaaaagagaacaaggattacgcaacttct
gataaaatcagattgggcctgcaaagtatgggtatccaactgaaagacagcaaagaagga
acgacctggagtaaagcctaa
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