Pedobacter gandavensis: QG516_17295
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Entry
QG516_17295 CDS
T09013
Name
(GenBank) DeoR/GlpR family DNA-binding transcription regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgj03000
]
QG516_17295
Transcription factors [BR:
pgj03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
QG516_17295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
MarR_2
CggR_N
HTH_41
DUF2540
HTH_Mga
HTH_27
Put_DNA-bind_N
Motif
Other DBs
NCBI-ProteinID:
WGQ08292
LinkDB
All DBs
Position
complement(4116967..4117731)
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AA seq
254 aa
AA seq
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MINIAERHQFILHRIQAEGSVDVQVLCKELDVSSVTIRKDLKLLEDKKLVFRTHGGATLN
NPYTVDRPVNEKEQLQSSEKLGIAAAAAVLVKDNDSIIIASGTTVLALARAIKPQGNLTV
ITSALNVALELIHHDNIDVIQLGGLLRKSSTSVTGPYSDNILSNVFCSKLFLGVDGIDLD
FGLTTTNAFEAQLNKQMMDASQKVIVLADSTKFGKRGFGKICGIEEVDHIITDSRISPQI
LQQLESLGIEVTIV
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacatagcagaaagacatcaattcattctccatagaattcaagcagaaggatct
gtagatgttcaggttttatgcaaggagctggatgtttcttcggtgaccattcgtaaggac
ctgaaactactcgaagacaaaaagctggttttcagaacccatggtggagctacgttaaac
aacccttatacggtagatcgacctgtaaacgagaaagagcaattacaatcttcagaaaag
ctgggcatagcggctgcggcagcagtattggtcaaggacaatgattcgattatcattgct
tctggcaccacggtactggcattggccagagccattaagcctcagggtaacctcacggtc
atcacttctgcattgaacgtcgccttagaattgatccaccacgacaacattgacgtgatt
cagttgggcggcttattgagaaaaagctcgacttctgtcaccgggccctattcagacaat
atcctgagcaatgttttctgcagtaaattatttcttggcgtagatgggattgatttggat
tttggcctcaccaccactaatgcttttgaagcacagctgaacaagcaaatgatggacgcc
tcacaaaaagtaattgtactggcagactctaccaaattcggaaagagaggattcggaaaa
atctgcggcatagaagaagtcgatcacatcattaccgatagccgcatttcccctcagatt
ttacagcagctggaaagcctcggcatcgaagtgaccatcgtttaa
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