Pedobacter gandavensis: QG516_17740
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Entry
QG516_17740 CDS
T09013
Symbol
rlmH
Name
(GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
KO
K00783
23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:
2.1.1.177
]
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgj03009
]
QG516_17740 (rlmH)
Enzymes [BR:
pgj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.177 23S rRNA (pseudouridine1915-N3)-methyltransferase
QG516_17740 (rlmH)
Ribosome biogenesis [BR:
pgj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
QG516_17740 (rlmH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOUT_MTase
TrmI-like_N
Motif
Other DBs
NCBI-ProteinID:
WGQ08379
LinkDB
All DBs
Position
complement(4207931..4208404)
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AA seq
157 aa
AA seq
DB search
MKITLLVVGKTEDKYLIEGIDKYLKRLKHYINFSLVVIPDVKNTKNLTEAQQKSKEAELI
LKQISNLDTVILMDEKGKKYTSVLFSNYLNKQMIGSVQHLIFIIGGPYGFDESVYQRANG
SMSLSDMTFSHQMVRLFFVEQLYRAFSILKGEPYHHE
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattacattattggttgtaggaaaaaccgaagataaatacctgattgaggggatt
gacaaatatttgaaaaggttaaaacactatatcaacttcagcctggtggtgattcctgat
gtaaaaaacacgaaaaacctgactgaagcacagcagaaaagcaaagaagcagagctgatt
ttaaaacagatcagtaacctggatacggtcattctgatggatgagaaagggaagaaatat
acttcggtattattttccaattacctgaataaacagatgattggcagtgtgcagcatctt
attttcatcattggcggtccttatggctttgatgaaagtgtgtaccaacgtgccaatgga
agtatgtctttatcagacatgacattttctcaccagatggtgcgtctattttttgtagag
cagctttaccgcgcgttcagtattttaaagggagagccttatcaccacgaataa
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