Pedobacter gandavensis: QG516_17940
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Entry
QG516_17940 CDS
T09013
Name
(GenBank) DNA repair protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QG516_17940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgj03400
]
QG516_17940
Enzymes [BR:
pgj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
QG516_17940
DNA repair and recombination proteins [BR:
pgj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QG516_17940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
WGQ08419
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All DBs
Position
4256884..4257786
Genome browser
AA seq
300 aa
AA seq
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MLASCFFLAVPADFNFGECLWFLDRGFDDCLYSVAKNSVTRALQLTNGLALVRIEEEDEQ
LKVSVLNRALSPEEIVELKGFVNDWFDLDLDLKPFYELMLRDPRLSFMKAHYFGLRLIGI
PDLFEAICWAIIGQQINLTFAYKLKRKLVERYGETLDFEGQQYFLFPKPEVLVNAVQEEL
QAMQFSRSKAAYVLQIAAAFDDLRLSKSGLLAMPDLASRQKALINVKGVGVWTANYALMK
SLKERSCIPHGDAGLLNALVNLGIIKDKKDVDEIEAFFSGYEGWESYLVFYLWRTLSKRV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgttagcatcgtgtttctttcttgctgttcccgctgattttaactttggagaatgtctg
tggtttttagaccgtggctttgatgattgcctgtacagtgtagctaaaaacagtgtgacc
agggcactgcagttgacaaatgggctcgcattggttcgtatcgaagaggaggatgaacag
ttaaaggtttctgttttaaatcgggctttaagccctgaagaaattgttgaattgaaaggt
tttgtgaatgactggtttgatctggacctggatcttaagccattctatgaattgatgctc
agagatcctcgtttgtcttttatgaaggcacactattttggtcttcggctgatcggcatc
cccgatttgtttgaagccatctgctgggccatcatcggacagcagatcaatttaactttt
gcctataagctcaaaagaaaactggtagaacgctacggagaaacattggattttgagggg
caacagtattttctttttccaaagccagaagttttagtaaatgcagtacaggaagaattg
caggccatgcaattttctagaagcaaagcggcgtatgtcttacagatcgccgctgctttt
gatgatctaaggctcagtaaatccgggttacttgcaatgcctgatctagcctcccgtcaa
aaggctttgatcaatgtgaaaggagtgggggtttggactgcaaattacgcactgatgaaa
agtttgaaggagcgctcttgtatccctcatggtgatgctgggttattaaacgcattggtg
aatctaggcatcatcaaagataaaaaggacgttgacgaaattgaagcctttttttctgga
tatgagggctgggaaagttaccttgttttttacctctggagaacgctttctaaacgagtg
taa
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