Pedobacter gandavensis: QG516_18640
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Entry
QG516_18640 CDS
T09013
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pgj03029
]
QG516_18640 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgj02000
]
QG516_18640 (bamA)
Mitochondrial biogenesis [BR:
pgj03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
QG516_18640 (bamA)
Transporters [BR:
pgj02000
]
Other transporters
Pores ion channels [TC:
1
]
QG516_18640 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
Motif
Other DBs
NCBI-ProteinID:
WGQ12595
LinkDB
All DBs
Position
4414529..4417027
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AA seq
832 aa
AA seq
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MAQIRPQSNPATPTLKVNGLDLDYFNPKEYTIADVTLTGTKFLDKDVIITLSKLIKGERI
VLPGEATANAIKILWEQGLFDDVKLDIAKIEGDSVYFDIEVVERPRLSSFDIQGVSKSQK
TDILEKLNAKSTKSIINENLYNSTTSTIKKYLLEKGYFFTTVNYKTKPDPNQENHVILEV
IVDKGRKVKVHEINFTGNEVFSDAKLRKFLKKTKQQAFYKVFGSGKFNKEKYDEDKKTLI
AKIQDRGYRDAVILKDSIYRYNDKSIGIKIDLFEGPKYYFGDISWVGNAKYSGKDLERIL
GIEKGEVFSEEKLERKLRGSPNSDDVSSLYLNDGYLTFNVDPIQTKIKGDTIDMEIRIYE
GPQYTNNRITVRGNTITNDRVVLRTVRTKPGDKFSKDLLIRTVRDIGQLGNFDESKTVPT
PKPNPADGTVDIEYTVEEKPSDQIELSGGFGGGNIIGTLGLTFNNFSLRNLFNPSAYKPL
PKGDGQKLSLRGQTNGKYYQSYSFSFSEPWLGGKKPVSFGVSAFTSLQSNGRKVDDPLGQ
QQRIRLNGVTVSLGRMLKWPDNYFQLSHALSFQQYILNNYGGYKFSTGTAYNISLAQELS
RDSRDHPIFPQGGSYFKFTIQATPPYSLMNKLNYKTASDKEFYKFTEYHKWKFESQWFHK
LAGKFVVKAQAQFGFLGSYNKEVGDPAFERFKLGGDGMQGFDFLQGSELIAMRGYANSAV
IPNGANVAIAQQSGSPIFAKYVMEIRYPVIASSSATAFLVAFAEGGNTWNKFGDFNPFNI
RRSAGFGAKIFLPIFGLLGIDYGIPFDKIPGIENGGKQSFTFSIAQQMGGFN
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcacagatccgtcctcagtccaatcctgcaactcctacattaaaagttaatggcctg
gatctggattattttaaccccaaggaatacactatcgcagatgtaaccctgactggaacg
aaatttctagataaagacgtgatcattaccctttcaaaattaattaaaggggaacgcatt
gtacttcctggtgaagcaacagcaaacgcaattaaaatcctttgggaacaaggattattt
gatgatgtaaaattagacattgctaagatcgaaggtgattcggtttactttgatattgaa
gtggtagagcgtccgcgcctttcctcttttgatattcaaggtgtgagtaaatctcagaaa
acagacattctggagaaactgaatgcaaagtctacgaaatctattatcaacgaaaactta
tacaattcaaccaccagtaccattaaaaagtacttgttagagaaaggttatttctttact
acggtaaattataagactaagccagatccaaatcaggagaaccacgtgattttggaagtg
atcgtagacaaaggccgtaaggtaaaagttcatgagatcaactttacaggaaatgaagtt
ttttcggatgcgaaactgcgtaagttcttaaagaaaacaaaacaacaggctttctataaa
gtcttcggatcgggtaaattcaataaagaaaaatacgacgaggataagaaaacactgatt
gctaaaatccaggacagaggttaccgtgatgcggtgattctaaaagacagtatttaccgt
tacaacgataaatctatcggtattaagatcgacttatttgaaggtcctaaatactatttc
ggagacatctcctgggtaggaaatgcgaagtattcaggaaaagacctggagcgtatttta
ggcattgaaaaaggagaggtattcagtgaggaaaaattagaacgtaaactaagaggcagt
ccaaatagtgatgacgtttccagtttatacctgaatgatggatacttaacttttaacgtt
gaccctattcagacaaaaattaaaggcgataccattgatatggaaatccgtatctatgaa
ggtcctcaatataccaacaaccgtatcacagtgagaggaaatacgatcactaacgataga
gtagtattgcgtacagtgcgtaccaagccaggtgataagttctctaaagatctattgatc
cgtacggttcgtgacatcggccaattgggtaactttgatgaatctaaaaccgtacctaca
cctaagccaaatcccgctgatggaaccgtagatattgaatatacagtggaagaaaaacct
tctgatcagattgaattatctggtggttttggtggtggtaacatcatcggtaccttagga
cttaccttcaataacttctccttaagaaaccttttcaatccaagtgcttacaaaccttta
ccaaaaggtgatggtcagaaattaagtttacgtggacaaacgaatggtaaatactaccaa
tcttacagtttctctttctctgagccatggttaggtggtaaaaaaccagtaagttttggg
gtaagtgcatttacttccctacagtctaatggacgtaaagtggatgatccactaggtcag
cagcaaagaatcagattgaatggggtaactgttagtttgggtagaatgttaaaatggcca
gacaattatttccagttgagccatgccttgagtttccagcagtatattctgaacaattat
ggtggttataaattcagtaccggtactgcttataacatcagtttagcacaagagctgagc
agggattcacgtgatcatcctatcttccctcaaggtggttcatatttcaaatttacaatt
caggcaacacctccatactcgttgatgaacaagttgaactataaaactgcttctgataaa
gaattctataaattcacagagtaccacaaatggaaatttgaatctcaatggttccataaa
ctggcaggcaaattcgtagtgaaagcacaggcacagtttggtttcttaggctcatacaat
aaagaagttggagatccagccttcgagcgtttcaaactgggtggtgatggtatgcaaggt
ttcgacttcctgcaaggatcagagctgatcgccatgcgtggttatgcgaactctgcagta
attcctaatggcgcaaacgtagccatcgcacagcagtcaggtagcccgatcttcgctaag
tatgttatggaaatcagataccctgtaattgcaagttcgtctgctactgccttccttgtg
gcttttgctgagggtggtaatacctggaacaagttcggtgatttcaatccttttaacatt
aggcgctctgcaggttttggtgcgaagatatttttaccgatatttggattattgggtatt
gattatggtattcctttcgataaaattcctggaattgaaaacggaggaaagcaatccttt
acctttagtattgcgcaacagatgggtggatttaattaa
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