Pedobacter gandavensis: QG516_18680
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Entry
QG516_18680 CDS
T09013
Name
(GenBank) dCMP deaminase family protein
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00240
Pyrimidine metabolism
pgj01100
Metabolic pathways
pgj01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
QG516_18680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pgj02044
]
QG516_18680
Enzymes [BR:
pgj01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
QG516_18680
Secretion system [BR:
pgj02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
QG516_18680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC_N
PCSK9_C3
SNAD4
APOBEC2
NAD1
XOO_2897-deam
Motif
Other DBs
NCBI-ProteinID:
WGQ08556
LinkDB
All DBs
Position
4424596..4425060
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AA seq
154 aa
AA seq
DB search
MSKKSFDHIYMNLAVDLAARSHCVRAHVGAVLTKDTRIISIGYNGPPPETHNCDEEWPET
GCDRDSRGSCSLALHAEENAILYASKNGSKIEGATLYTTLSPCIACARLILSSGIRKVLY
LDSYAEYKGLPSDEGVDFLRRFGVEVNKYQIEVN
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaagagtttcgatcatatttatatgaatctggcagtggatcttgctgcacgt
tcccattgtgtaagggcacatgtaggtgcggtactgacaaaagacaccaggatcatttct
atcggttataacgggccaccgccagaaacacacaactgtgatgaagaatggccggagaca
ggctgcgacagggattcccgcggcagctgctctctcgccctgcatgcagaagagaatgcc
attttatatgcttcaaagaatggttccaagattgaaggcgccaccttatacaccacactt
tccccttgtatcgcctgtgcgcggttaattttatcctccggaatcagaaaggttttatac
ctggattcttatgcggaatacaaaggattacccagtgatgaaggtgtagattttctgaga
agatttggtgtggaggtaaataagtatcaaatcgaggttaattga
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