Pedobacter gandavensis: QG516_19370
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Entry
QG516_19370 CDS
T09013
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00540
Lipopolysaccharide biosynthesis
pgj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
QG516_19370
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pgj01005
]
QG516_19370
Lipopolysaccharide biosynthesis proteins [BR:
pgj01005
]
Lipid A
QG516_19370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
WGQ08675
LinkDB
All DBs
Position
complement(4610192..4611154)
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AA seq
320 aa
AA seq
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MKAISKILLPLSLIYLLATSPVSAQNFKNEFGFKSDNDSYLLQGSDRYYTNGLFINFRHA
LNQSGLPEKLEKKTYEIAIGQKMYNPYSGAAPDPAKQDRPFAGYLYAEAGLNWFYKNESI
LKTSAQIGVTGPASLAEKGQELLHKSVGFYQLEGWDYQIKEEMQVNLSAQYTRLLHRFKD
QAADFSFEGYANVGTTFSGAGAGILFRAGRINQLFNTAYTNSVIGNQSKTKNLVKSELFF
YAKPQLNFVAYDATIQGSMFNNDSPVTFGVKPVVFAQQLGFNYSSQRFTFDFGMIFKTKE
VKSTARAHQYGSISMFYRFN
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctatcagcaaaatactgctccctttatccctgatttacctgctggccaccagt
ccggtttcagcacaaaacttcaaaaatgagtttggttttaaaagcgacaatgattcctac
ctgctgcagggctctgaccgctattataccaatggcttatttatcaatttccgccatgcc
ttgaatcaaagcgggcttccggaaaagctggagaagaaaacttatgaaattgccattggg
caaaagatgtacaacccttattctggtgcggcacccgatccggcaaaacaagatcgccca
tttgcaggctacttatatgcggaagctggattgaactggttttataaaaatgaaagcatt
ttgaaaaccagcgcgcagattggtgtgacaggtccagcatcactggcagaaaaaggccag
gagctcttacataaatccgttggtttctatcaactggagggctgggattaccagattaaa
gaagaaatgcaggtaaacctatccgcgcaatacaccagattattgcaccgttttaaggac
caggctgctgacttctcttttgaaggttatgcgaatgttggaacgacctttagtggtgct
ggtgcagggattttattcagagcagggcgaatcaatcagcttttcaacacggcttatacc
aattcagtaattggaaaccagtcgaaaacaaagaatttagtgaaaagtgagctgttcttt
tatgcaaaacctcagcttaattttgtggcttatgatgccaccatacaaggcagtatgttt
aacaatgatagtccggttacttttggggttaaaccagtcgtgtttgcgcagcaattggga
tttaattacagcagtcagcgctttaccttcgattttgggatgatatttaagactaaggaa
gtgaaaagtaccgccagagcccatcaatatggcagtattagtatgttttaccgcttcaac
taa
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