Pedobacter gandavensis: QG516_19515
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Entry
QG516_19515 CDS
T09013
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pgj
Pedobacter gandavensis
Pathway
pgj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
QG516_19515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgj03400
]
QG516_19515
DNA repair and recombination proteins [BR:
pgj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
QG516_19515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
WGQ08703
LinkDB
All DBs
Position
4639095..4639856
Genome browser
AA seq
253 aa
AA seq
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MRSIWKGAIGFGLVNIPVKLFSGVQSSTLDLDMLDERDHANIKFKRVNEKTQKEVPFDHI
VKGYYLKDQYIVLNEHDFEEVKPEKTKVIEIENFVDLVDINPVYYETSYYTQPEAQGKKA
YALLLQALMKSKKAGVARFVLRNHENLCVIHPMDGIIVITKIRFQEEIRDTREFRLKEEP
VIKPKELSVGMALIKQYAAPFNIDSFKNDYSKELLKIIKAKAQGKRATVKKMKPKKASSD
DLYEQLLESLKGA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctatctggaaaggtgctatcggatttggtctggtaaatatcccagtgaaatta
ttctcaggcgtacaaagcagtacgctggatttagatatgctggacgaaagagaccatgcc
aatatcaagtttaagagagtaaatgaaaaaacgcagaaggaggttcctttcgatcatatt
gtgaaaggctattacctgaaagaccaatatattgtgttgaatgagcatgattttgaagag
gtgaaaccggaaaaaacgaaggtcatagaaattgaaaattttgttgatctggttgatatt
aatccggtgtattatgaaacttcctattatactcagcctgaagctcaagggaaaaaggct
tatgctttgcttttacaggcgctgatgaagtcaaagaaggctggagttgcacgttttgta
ttgcgtaaccatgaaaatctttgtgtcattcatccaatggatgggatcatcgtcattaca
aagattcgttttcaggaagaaatcagggataccagggaattcaggttaaaagaagagcct
gtgatcaagcccaaagaattgtctgtaggaatggccttgattaagcagtatgctgcccct
tttaatatcgacagttttaaaaatgactattcaaaagagttgttaaagatcataaaagca
aaagcccagggcaaaagagcaacggttaaaaagatgaaacctaaaaaagcaagcagcgac
gatttatatgagcaattgctggaaagtttgaaaggagcctga
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