Pedobacter gandavensis: QG516_19830
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Entry
QG516_19830 CDS
T09013
Name
(GenBank) alpha-L-fucosidase
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00511
Other glycan degradation
pgj04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
QG516_19830
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
QG516_19830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgj04147
]
QG516_19830
Enzymes [BR:
pgj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
QG516_19830
Exosome [BR:
pgj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
QG516_19830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
F5_F8_type_C
F5_F8_type_C_2
GHL6
DUF7402
CBM_AftD
DUF4988
Motif
Other DBs
NCBI-ProteinID:
WGQ08764
LinkDB
All DBs
Position
4710675..4712114
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AA seq
479 aa
AA seq
DB search
MNFNRMKKSSFFFLCSFLLCTGGTFAQKAPAPYGAVPNKNQLAWQDMEYYMFIHFGPNTF
TDKEWGHGDEDPKVFNPTKLDARQWARTAKAAGMKAIIITAKHHDGFCLFPSKYSTHTVR
ESAWKNGKGDVLKELSAACKEYGLKFGVYLSPWDRNHPKYGTPEYNQVFANTLKEVHTQY
GPVFEQWFDGAKGEKEKNQDYDFKLFNSIVRANNPQAVIFSDIGPDARWMGNERGVAGTT
NWSTLNTDGFGVGAAAPAASVLNTGNENGKYWIPAEVDVSIRPGWFYSANTDDKVKTLKE
LVSIYETSIGRNGNLLLNVPVNREGLIHPNDSTRLMEFKRTIDASYKTNLARGKKVTVSN
TRKGAQFTAANLTDGNPATYWATADQLKTAAITIDFGKATELNRLVLQEYIALGQRVKSF
SVEYFDGDTYKKLDQQTTIGHKRILSFPRIKTTKIRVHILEANACPVLSEIAAYNAADL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaccgtatgaagaagtcgtcattttttttcttatgttcttttttgctgtgt
accggtggtacttttgcgcaaaaggcacctgctccttatggagcagtcccaaataaaaac
cagctggcatggcaggatatggaatactatatgttcatccatttcgggccaaataccttt
accgataaggagtgggggcatggcgatgaagatcctaaagtcttcaacccaaccaaactg
gatgcccgtcaatgggcgcgtaccgcgaaagctgcagggatgaaagccattattatcacc
gcaaaacaccacgatggtttttgcctgtttccaagtaaatacagtactcataccgtaaga
gagagtgcctggaaaaatggcaaaggcgatgtgttgaaagaactttctgcagcctgtaaa
gaatatggcttgaaattcggcgtatacctatccccatgggaccgtaaccatcctaaatat
ggcacgccagagtacaatcaagtgtttgccaatacgctgaaagaagtacatacgcagtat
gggcctgtatttgagcaatggtttgacggtgcaaaaggagaaaaagagaaaaatcaggac
tacgactttaagctgttcaacagcattgtcagagccaataatccacaagcggtgatcttt
agcgacattggtcctgatgcccgctggatgggaaatgaaagaggagttgccggaactacc
aactggtctaccttaaataccgatggctttggggtaggggcagcagcacctgcagcaagc
gtattgaacaccggaaatgaaaatggaaaatactggattcctgcggaagtagatgtttcc
atcagaccaggatggttctatagcgcgaatacagatgataaagtgaaaactttaaaagaa
ctggtctctatttatgaaacctccatcggacgtaatggcaatctgttgctgaacgttccg
gtaaaccgggaaggactgatccatcccaatgattccacccgcttgatggaattcaaaaga
accattgatgccagctataagacaaacctggcgagaggaaagaaagttacggtgagcaat
accagaaaaggcgcacaatttactgctgcaaacctgactgatggaaacccggctacttac
tgggctacagctgatcagctgaagaccgctgcgattaccattgattttggtaaagcaacg
gaactcaaccgcctggttttacaggaatatatcgccctcggacaacgtgtcaaatcattt
tctgtcgagtatttcgatggcgatacttataaaaaattagatcagcaaaccacgattggc
cataagcgaatcctttcttttccaagaataaaaaccactaaaatccgtgtccatatcctg
gaagcaaatgcctgtccggtgctatcagagatagcagcatataacgcagcggacttatag
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